Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNU4-47P-201ENST00000410876 114 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AC069218.2-201ENST00000411665 344 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 TATDN1P1-201ENST00000414123 891 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN6P56747 AL159169.1-201ENST00000421119 127 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AC005189.1-201ENST00000431286 310 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 MTND4LP7-201ENST00000431728 294 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AC107083.1-201ENST00000439643 279 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AC140076.1-201ENST00000449897 361 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 DNAJC19P8-201ENST00000452887 259 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN6P56747 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN6P56747 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN6P56747 AC112198.1-201ENST00000505369 1220 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN6P56747 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN6P56747 PCBP2P3-201ENST00000509726 843 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN6P56747 ARL2BPP6-201ENST00000512757 439 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 RN7SKP60-201ENST00000516985 239 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AL139174.1-201ENST00000531489 886 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.14□□□□□ -1.91
CLDN6P56747 AC025918.2-201ENST00000558683 763 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 EIF5A2P1-201ENST00000564027 460 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 MTATP6P25-201ENST00000574491 261 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN6P56747 MIR3690-201ENST00000580266 75 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 RPL12P50-201ENST00000603116 116 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 KATNBL1P1-201ENST00000605192 748 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AC135178.6-201ENST00000605314 398 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 RMST_8.1-201ENST00000610287 165 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AC005156.1-201ENST00000613371 573 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AC018692.3-201ENST00000623929 123 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN6P56747 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN6P56747 AL590396.2-201ENST00000636511 1041 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CLDN6P56747 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CLDN6P56747 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN6P56747 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CLDN6P56747 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLDN6P56747 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN6P56747 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN6P56747 MTCO1P18-201ENST00000455518 1419 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN6P56747 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN6P56747 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN6P56747 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN6P56747 RNU1-140P-201ENST00000365040 165 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 UBE2V1P11-201ENST00000411559 285 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 HMGB3P31-201ENST00000413333 595 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 AC007390.1-201ENST00000415722 356 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 TOMM22P1-201ENST00000418578 312 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 AL513174.1-201ENST00000423182 629 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 CR848007.2-201ENST00000424918 787 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN6P56747 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN6P56747 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN6P56747 AC007000.2-201ENST00000442564 487 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN6P56747 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN6P56747 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN6P56747 RPS4XP13-201ENST00000483219 789 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN6P56747 FCF1P3-201ENST00000496394 590 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 AC010374.2-201ENST00000512933 535 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 SNORA48.9-201ENST00000516419 162 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN6P56747 AP006245.1-201ENST00000522549 120 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 AP000926.4-201ENST00000527351 454 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN6P56747 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN6P56747 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
CLDN6P56747 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN6P56747 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN6P56747 OR4G1P-201ENST00000588632 938 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN6P56747 IGHV3-29-201ENST00000604817 344 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 AL365503.1-201ENST00000605247 905 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN6P56747 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN6P56747 AC008121.2-201ENST00000614647 523 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN6P56747 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN6P56747 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CLDN6P56747 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN6P56747 RIOK3P1-201ENST00000418778 1528 ntBASIC3.13□□□□□ -1.91
CLDN6P56747 ZNF37BP-203ENST00000452306 1352 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CLDN6P56747 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN6P56747 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN6P56747 AC068647.1-201ENST00000489539 2265 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 SAGE4P-201ENST00000442271 3381 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN6P56747 RNU6-883P-201ENST00000384597 107 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN6P56747 AP000567.1-201ENST00000406413 156 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 RPL31P2-201ENST00000413849 377 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms