Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AL035246.1-201ENST00000433554 1255 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 RPS7P2-201ENST00000435134 607 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PKNOX1P55347 Z99127.3-201ENST00000448158 395 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 RPS17P11-201ENST00000474297 293 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 NCOR1P1-202ENST00000486162 291 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 RNF138P1-201ENST00000502765 546 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AC091860.1-201ENST00000505723 432 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 AC104619.4-201ENST00000510773 249 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 AC104057.1-201ENST00000515547 497 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 SCARNA20.6-201ENST00000517251 106 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 RPL12P22-201ENST00000519073 490 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX1P55347 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.25□□□□□ -1.89
PKNOX1P55347 GTF2IP22-201ENST00000554443 182 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.25□□□□□ -1.89
PKNOX1P55347 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.25□□□□□ -1.89
PKNOX1P55347 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.25□□□□□ -1.89
PKNOX1P55347 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX1P55347 SNRPGP15-201ENST00000600149 222 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 AC011468.4-201ENST00000603942 409 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 AC090425.2-201ENST00000608818 501 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PKNOX1P55347 AC068831.8-201ENST00000620171 435 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 AC068620.4-201ENST00000636730 1182 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 AC009093.8-201ENST00000641769 292 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PKNOX1P55347 AL672296.1-201ENST00000427780 2158 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PKNOX1P55347 ZNF37BP-203ENST00000452306 1352 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 AC118273.1-201ENST00000525324 3006 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 U3.11-201ENST00000364476 212 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PKNOX1P55347 SNORA5A-201ENST00000384111 134 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 SNORD17-201ENST00000390930 237 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PKNOX1P55347 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.24□□□□□ -1.89
PKNOX1P55347 RNU6-575P-201ENST00000411326 105 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PKNOX1P55347 UBE2V1P9-201ENST00000414760 368 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 HMGB3P23-201ENST00000414981 585 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX1P55347 SFR1P2-201ENST00000421841 730 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AL445584.1-201ENST00000431451 330 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 B3GNT2P1-201ENST00000434960 952 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 AC239367.2-201ENST00000447309 705 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX1P55347 Z99714.1-201ENST00000450463 807 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.24□□□□□ -1.89
PKNOX1P55347 RPL7P15-201ENST00000461190 712 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AC106707.2-201ENST00000484182 374 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PKNOX1P55347 AC109471.1-201ENST00000511631 612 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 RN7SKP116-201ENST00000516902 319 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 MTND1P36-201ENST00000522384 936 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.24□□□□□ -1.89
PKNOX1P55347 OR8K4P-201ENST00000534608 872 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 AC092470.1-201ENST00000546187 132 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.24□□□□□ -1.89
PKNOX1P55347 ZNF971P-201ENST00000562068 1249 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AC002487.1-201ENST00000604565 994 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 IGHV3-29-201ENST00000604817 344 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 BNIP3P19-201ENST00000605397 577 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 AL365400.2-201ENST00000605604 902 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AC008759.3-201ENST00000613300 508 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 AL121772.2-201ENST00000614331 297 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.24□□□□□ -1.89
PKNOX1P55347 AC098679.5-201ENST00000624394 571 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 ZNF285B-201ENST00000561698 1767 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PKNOX1P55347 AC117529.2-201ENST00000512159 2068 ntBASIC3.24□□□□□ -1.89
PKNOX1P55347 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.24□□□□□ -1.89
PKNOX1P55347 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PKNOX1P55347 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
PKNOX1P55347 RNA5SP295-201ENST00000362655 121 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 RNU6-374P-201ENST00000364146 108 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.23□□□□□ -1.89
PKNOX1P55347 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PKNOX1P55347 RNU6-549P-201ENST00000384433 107 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms