Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.24□□□□□ -1.89
ATRXP46100 RPS29P21-201ENST00000496272 170 ntBASIC3.24□□□□□ -1.89
ATRXP46100 AC091951.3-201ENST00000504093 246 ntBASIC3.24□□□□□ -1.89
ATRXP46100 AC138938.1-201ENST00000515431 782 ntBASIC3.24□□□□□ -1.89
ATRXP46100 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.24□□□□□ -1.89
ATRXP46100 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.24□□□□□ -1.89
ATRXP46100 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.24□□□□□ -1.89
ATRXP46100 PART1_2.1-201ENST00000612397 250 ntBASIC3.24□□□□□ -1.89
ATRXP46100 AC007494.3-201ENST00000624660 743 ntBASIC3.24□□□□□ -1.89
ATRXP46100 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.24□□□□□ -1.89
ATRXP46100 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATRXP46100 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ATRXP46100 AC017007.4-201ENST00000503353 1352 ntBASIC3.23□□□□□ -1.89
ATRXP46100 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATRXP46100 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATRXP46100 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
ATRXP46100 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATRXP46100 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.23□□□□□ -1.89
ATRXP46100 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATRXP46100 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATRXP46100 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ATRXP46100 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC3.23□□□□□ -1.89
ATRXP46100 FRG1CP-201ENST00000358464 769 ntBASIC3.23□□□□□ -1.89
ATRXP46100 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ATRXP46100 VDAC1P9-201ENST00000412766 841 ntBASIC3.23□□□□□ -1.89
ATRXP46100 AF274854.1-201ENST00000413236 615 ntBASIC3.23□□□□□ -1.89
ATRXP46100 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.23□□□□□ -1.89
ATRXP46100 HMGB1P49-201ENST00000418882 569 ntBASIC3.23□□□□□ -1.89
ATRXP46100 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.23□□□□□ -1.89
ATRXP46100 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.23□□□□□ -1.89
ATRXP46100 SKP1P3-201ENST00000429280 487 ntBASIC3.23□□□□□ -1.89
ATRXP46100 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.23□□□□□ -1.89
ATRXP46100 RPL23AP89-201ENST00000439324 255 ntBASIC3.23□□□□□ -1.89
ATRXP46100 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.23□□□□□ -1.89
ATRXP46100 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.23□□□□□ -1.89
ATRXP46100 MTND1P29-201ENST00000448112 647 ntBASIC3.23□□□□□ -1.89
ATRXP46100 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.23□□□□□ -1.89
ATRXP46100 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.23□□□□□ -1.89
ATRXP46100 RNU6-759P-201ENST00000516740 103 ntBASIC3.23□□□□□ -1.89
ATRXP46100 PDCL2P2-201ENST00000533651 189 ntBASIC3.23□□□□□ -1.89
ATRXP46100 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.23□□□□□ -1.89
ATRXP46100 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.23□□□□□ -1.89
ATRXP46100 MIR3915-201ENST00000578518 97 ntBASIC3.23□□□□□ -1.89
ATRXP46100 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.23□□□□□ -1.89
ATRXP46100 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.23□□□□□ -1.89
ATRXP46100 LSM1P2-201ENST00000604911 322 ntBASIC3.23□□□□□ -1.89
ATRXP46100 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.23□□□□□ -1.89
ATRXP46100 AC127502.3-201ENST00000636170 1206 ntBASIC3.23□□□□□ -1.89
ATRXP46100 AC241585.2-209ENST00000638217 143 ntBASIC3.23□□□□□ -1.89
ATRXP46100 AC006927.2-201ENST00000639256 389 ntBASIC3.23□□□□□ -1.89
ATRXP46100 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.23□□□□□ -1.89
ATRXP46100 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATRXP46100 AC000374.1-201ENST00000434698 1745 ntBASIC3.23□□□□□ -1.89
ATRXP46100 RNU1-87P-201ENST00000363727 170 ntBASIC3.22□□□□□ -1.89
ATRXP46100 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.22□□□□□ -1.89
ATRXP46100 SUMO1P1-201ENST00000497904 306 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.22□□□□□ -1.89
ATRXP46100 AC008565.1-201ENST00000509046 885 ntBASIC3.22□□□□□ -1.89
ATRXP46100 HMGB1P1-201ENST00000522557 636 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.22□□□□□ -1.89
ATRXP46100 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.22□□□□□ -1.89
ATRXP46100 AL354943.1-201ENST00000572103 781 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.22□□□□□ -1.89
ATRXP46100 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.22□□□□□ -1.89
ATRXP46100 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.22□□□□□ -1.89
ATRXP46100 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.22□□□□□ -1.89
ATRXP46100 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.22□□□□□ -1.89
ATRXP46100 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
ATRXP46100 DDX43P2-201ENST00000604753 1354 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AC093010.3-201ENST00000570269 15214 ntBASIC3.22□□□□□ -1.89
ATRXP46100 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATRXP46100 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
ATRXP46100 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
ATRXP46100 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATRXP46100 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.22□□□□□ -1.89
ATRXP46100 AC067945.1-201ENST00000342609 618 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AL136131.1-201ENST00000406079 803 ntBASIC3.22□□□□□ -1.89
ATRXP46100 MIR1271-201ENST00000408537 86 ntBASIC3.22□□□□□ -1.89
ATRXP46100 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.22□□□□□ -1.89
ATRXP46100 RNU4-74P-201ENST00000411280 161 ntBASIC3.22□□□□□ -1.89
ATRXP46100 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.22□□□□□ -1.89
ATRXP46100 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.22□□□□□ -1.89
ATRXP46100 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.22□□□□□ -1.89
ATRXP46100 MTCYBP12-201ENST00000440559 1134 ntBASIC3.22□□□□□ -1.89
ATRXP46100 ATP5C1P1-201ENST00000441945 895 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.22□□□□□ -1.89
ATRXP46100 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.22□□□□□ -1.89
ATRXP46100 RPL23AP23-201ENST00000452590 471 ntBASIC3.22□□□□□ -1.89
ATRXP46100 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.22□□□□□ -1.89
ATRXP46100 AL445669.2-201ENST00000454425 421 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AC126121.1-201ENST00000482313 553 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AC025459.1-201ENST00000504072 156 ntBASIC3.22□□□□□ -1.89
ATRXP46100 ASNSP4-201ENST00000511103 447 ntBASIC3.22□□□□□ -1.89
ATRXP46100 SNORA70.18-201ENST00000516696 98 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AC010306.1-201ENST00000523223 1117 ntBASIC3.22□□□□□ -1.89
ATRXP46100 DUXAP5-201ENST00000529668 529 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AL512310.1-201ENST00000548639 172 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AP001269.3-201ENST00000588718 329 ntBASIC3.22□□□□□ -1.89
ATRXP46100 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms