Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.26□□□□□ -1.73
RFC1P35251 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.26□□□□□ -1.73
RFC1P35251 AL590229.1-201ENST00000603497 542 ntBASIC4.26□□□□□ -1.73
RFC1P35251 DUXAP11-201ENST00000603858 526 ntBASIC4.26□□□□□ -1.73
RFC1P35251 AC024560.3-201ENST00000608482 349 ntBASIC4.26□□□□□ -1.73
RFC1P35251 MIR6716-201ENST00000613413 80 ntBASIC4.26□□□□□ -1.73
RFC1P35251 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFC1P35251 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFC1P35251 MIR6758-201ENST00000620653 63 ntBASIC4.26□□□□□ -1.73
RFC1P35251 Z69908.1-201ENST00000622603 247 ntBASIC4.26□□□□□ -1.73
RFC1P35251 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.26□□□□□ -1.73
RFC1P35251 C2orf27A-204ENST00000623058 969 ntBASIC4.26□□□□□ -1.73
RFC1P35251 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RFC1P35251 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RFC1P35251 MTND5P24-201ENST00000438892 1767 ntBASIC4.26□□□□□ -1.73
RFC1P35251 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFC1P35251 AC097504.1-201ENST00000515103 2415 ntBASIC4.26□□□□□ -1.73
RFC1P35251 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.26□□□□□ -1.73
RFC1P35251 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFC1P35251 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFC1P35251 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.26□□□□□ -1.73
RFC1P35251 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RFC1P35251 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
RFC1P35251 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFC1P35251 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
RFC1P35251 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFC1P35251 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFC1P35251 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFC1P35251 OR4A15-201ENST00000314706 1035 ntBASIC4.25□□□□□ -1.73
RFC1P35251 SNRPEP3-201ENST00000338402 276 ntBASIC4.25□□□□□ -1.73
RFC1P35251 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RFC1P35251 Y_RNA.51-201ENST00000362725 102 ntBASIC4.25□□□□□ -1.73
RFC1P35251 SNORA62-201ENST00000365493 153 ntBASIC4.25□□□□□ -1.73
RFC1P35251 Y_RNA.436-201ENST00000384097 102 ntBASIC4.25□□□□□ -1.73
RFC1P35251 RNU6-921P-201ENST00000384361 107 ntBASIC4.25□□□□□ -1.73
RFC1P35251 DSTNP4-201ENST00000399472 474 ntBASIC4.25□□□□□ -1.73
RFC1P35251 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFC1P35251 SNORA3C-201ENST00000408792 125 ntBASIC4.25□□□□□ -1.73
RFC1P35251 HSPE1P12-201ENST00000412576 301 ntBASIC4.25□□□□□ -1.73
RFC1P35251 BTF3L4P1-201ENST00000413813 468 ntBASIC4.25□□□□□ -1.73
RFC1P35251 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC1P35251 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.25□□□□□ -1.73
RFC1P35251 AC234779.1-201ENST00000425910 285 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AL356276.2-201ENST00000435919 558 ntBASIC4.25□□□□□ -1.73
RFC1P35251 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.25□□□□□ -1.73
RFC1P35251 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.25□□□□□ -1.73
RFC1P35251 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.25□□□□□ -1.73
RFC1P35251 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.25□□□□□ -1.73
RFC1P35251 TRGVB-201ENST00000453257 471 ntBASIC4.25□□□□□ -1.73
RFC1P35251 SNRPGP5-201ENST00000456003 220 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC1P35251 RPL38P1-201ENST00000460914 211 ntBASIC4.25□□□□□ -1.73
RFC1P35251 MTND4LP3-201ENST00000468320 276 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.25□□□□□ -1.73
RFC1P35251 AP000893.1-201ENST00000474462 794 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AC013828.1-201ENST00000481845 158 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AC104685.1-201ENST00000502445 371 ntBASIC4.25□□□□□ -1.73
RFC1P35251 MTCYBP17-201ENST00000503579 789 ntBASIC4.25□□□□□ -1.73
RFC1P35251 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFC1P35251 RNU6-678P-201ENST00000516832 109 ntBASIC4.25□□□□□ -1.73
RFC1P35251 IGLVIV-53-201ENST00000520107 367 ntBASIC4.25□□□□□ -1.73
RFC1P35251 MRPL49P2-201ENST00000521066 465 ntBASIC4.25□□□□□ -1.73
RFC1P35251 HIGD1AP5-201ENST00000529959 259 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC1P35251 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.25□□□□□ -1.73
RFC1P35251 AC025884.1-201ENST00000556034 378 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC1P35251 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC1P35251 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC1P35251 AL451044.1-201ENST00000604867 238 ntBASIC4.25□□□□□ -1.73
RFC1P35251 HSPE1P14-201ENST00000605812 302 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.25□□□□□ -1.73
RFC1P35251 AC004825.2-201ENST00000616634 455 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AC006338.2-201ENST00000616864 791 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AC092650.2-201ENST00000619984 902 ntBASIC4.25□□□□□ -1.73
RFC1P35251 AL031667.3-201ENST00000620124 655 ntBASIC4.25□□□□□ -1.73
RFC1P35251 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.25□□□□□ -1.73
RFC1P35251 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFC1P35251 MIR6830-201ENST00000636015 70 ntBASIC4.25□□□□□ -1.73
RFC1P35251 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFC1P35251 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFC1P35251 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFC1P35251 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFC1P35251 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.25□□□□□ -1.73
RFC1P35251 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC1P35251 AL390862.1-201ENST00000635467 1469 ntBASIC4.24□□□□□ -1.73
RFC1P35251 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFC1P35251 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC1P35251 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC1P35251 RPL32P3-201ENST00000359025 275 ntBASIC4.24□□□□□ -1.73
RFC1P35251 SNORA60-201ENST00000362396 134 ntBASIC4.24□□□□□ -1.73
RFC1P35251 NPM1P11-201ENST00000417106 855 ntBASIC4.24□□□□□ -1.73
RFC1P35251 SDCBPP2-201ENST00000424643 885 ntBASIC4.24□□□□□ -1.73
RFC1P35251 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.24□□□□□ -1.73
RFC1P35251 C4BPAP2-201ENST00000428434 478 ntBASIC4.24□□□□□ -1.73
RFC1P35251 AL590103.1-201ENST00000434488 307 ntBASIC4.24□□□□□ -1.73
RFC1P35251 MTCO2P16-201ENST00000436962 677 ntBASIC4.24□□□□□ -1.73
RFC1P35251 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.24□□□□□ -1.73
RFC1P35251 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms