Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.73□□□□□ -1.65
POLR2AP24928 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.73□□□□□ -1.65
POLR2AP24928 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.73□□□□□ -1.65
POLR2AP24928 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
POLR2AP24928 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR2AP24928 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR2AP24928 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR2AP24928 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
POLR2AP24928 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR2AP24928 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
POLR2AP24928 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR2AP24928 RPS4XP5-202ENST00000449995 1334 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AP002001.2-201ENST00000529025 1469 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR2AP24928 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR2AP24928 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.72□□□□□ -1.65
POLR2AP24928 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR2AP24928 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
POLR2AP24928 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR2AP24928 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR2AP24928 SNORA4.1-201ENST00000364263 144 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 RNA5SP72-201ENST00000364442 117 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 VDAC2P1-201ENST00000399358 958 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AL139413.1-201ENST00000421309 217 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AL009174.1-201ENST00000426577 416 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AL512649.1-201ENST00000428997 581 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.72□□□□□ -1.65
POLR2AP24928 PGBD4P3-201ENST00000440731 581 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AC074344.1-201ENST00000512823 224 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AC093853.1-201ENST00000515689 483 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 SNORA70.24-201ENST00000517233 118 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR2AP24928 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR2AP24928 AC022878.1-201ENST00000530684 149 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AP002812.4-201ENST00000532139 286 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.72□□□□□ -1.65
POLR2AP24928 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR2AP24928 AC006504.3-201ENST00000586818 523 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR2AP24928 BNIP3P4-201ENST00000604946 565 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AL159169.2-201ENST00000610061 1269 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AC104260.1-201ENST00000616660 539 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AL158209.2-201ENST00000619266 216 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 AL139089.1-201ENST00000620372 975 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.72□□□□□ -1.65
POLR2AP24928 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR2AP24928 AC105074.1-201ENST00000623380 3095 ntBASIC4.72□□□□□ -1.65
POLR2AP24928 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR2AP24928 AC074029.4-201ENST00000624796 1859 ntBASIC4.71□□□□□ -1.65
POLR2AP24928 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.71□□□□□ -1.65
POLR2AP24928 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
POLR2AP24928 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
POLR2AP24928 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
POLR2AP24928 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
POLR2AP24928 Y_RNA.70-201ENST00000362886 110 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
POLR2AP24928 RNA5SP187-201ENST00000384400 119 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 RPS7P13-201ENST00000413955 498 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 MTND3P17-201ENST00000416968 344 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.71□□□□□ -1.66
POLR2AP24928 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.71□□□□□ -1.66
POLR2AP24928 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.71□□□□□ -1.66
POLR2AP24928 NPM1P24-201ENST00000428039 894 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 AC098614.3-201ENST00000438957 440 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 DNAJC19P8-201ENST00000452887 259 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.71□□□□□ -1.66
POLR2AP24928 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.71□□□□□ -1.66
POLR2AP24928 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.71□□□□□ -1.66
POLR2AP24928 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.71□□□□□ -1.66
POLR2AP24928 RNA5SP230-201ENST00000517039 122 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.71□□□□□ -1.66
POLR2AP24928 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.71□□□□□ -1.66
POLR2AP24928 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.71□□□□□ -1.66
POLR2AP24928 MIR3913-1-201ENST00000577744 102 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 AL031666.3-201ENST00000609320 1006 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 AL592295.2-201ENST00000612578 206 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 AL442067.2-201ENST00000614033 363 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.71□□□□□ -1.66
POLR2AP24928 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
POLR2AP24928 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.71□□□□□ -1.66
POLR2AP24928 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
POLR2AP24928 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
POLR2AP24928 AC005539.1-201ENST00000443768 1479 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
POLR2AP24928 AC139426.3-201ENST00000605648 2059 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 PRO1804-201ENST00000623780 2050 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
POLR2AP24928 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.71□□□□□ -1.66
POLR2AP24928 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.71□□□□□ -1.66
POLR2AP24928 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
POLR2AP24928 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
POLR2AP24928 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.71□□□□□ -1.66
POLR2AP24928 XGY1-201ENST00000381172 446 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
POLR2AP24928 NACAP7-201ENST00000407371 609 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 AC010385.1-201ENST00000412374 256 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.71□□□□□ -1.66
POLR2AP24928 AC093698.1-201ENST00000423843 571 ntBASIC4.71□□□□□ -1.66
POLR2AP24928 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms