Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC239868.2-201ENST00000564237 4527 ntBASIC6.25□□□□□ -1.41
RFX1P22670 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.25□□□□□ -1.41
RFX1P22670 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.25□□□□□ -1.41
RFX1P22670 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.24□□□□□ -1.41
RFX1P22670 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFX1P22670 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFX1P22670 EXOC5P1-201ENST00000510543 1969 ntBASIC6.24□□□□□ -1.41
RFX1P22670 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
RFX1P22670 C4BPAP1-201ENST00000415474 1893 ntBASIC6.24□□□□□ -1.41
RFX1P22670 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.24□□□□□ -1.41
RFX1P22670 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RFX1P22670 LARP1BP1-201ENST00000506036 1359 ntBASIC6.24□□□□□ -1.41
RFX1P22670 RNU6-989P-201ENST00000362756 107 ntBASIC6.24□□□□□ -1.41
RFX1P22670 RNA5SP132-201ENST00000364725 118 ntBASIC6.24□□□□□ -1.41
RFX1P22670 DBIP1-201ENST00000401435 260 ntBASIC6.24□□□□□ -1.41
RFX1P22670 RNU6-387P-201ENST00000411331 105 ntBASIC6.24□□□□□ -1.41
RFX1P22670 ATP5HP2-201ENST00000433885 485 ntBASIC6.24□□□□□ -1.41
RFX1P22670 RPL23AP43-201ENST00000446445 471 ntBASIC6.24□□□□□ -1.41
RFX1P22670 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 RN7SL57P-201ENST00000493687 290 ntBASIC6.24□□□□□ -1.41
RFX1P22670 RPL7P23-201ENST00000493874 747 ntBASIC6.24□□□□□ -1.41
RFX1P22670 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 RNU6-1092P-201ENST00000516955 87 ntBASIC6.24□□□□□ -1.41
RFX1P22670 RN7SKP234-201ENST00000517173 224 ntBASIC6.24□□□□□ -1.41
RFX1P22670 PTP4A1P6-201ENST00000531034 478 ntBASIC6.24□□□□□ -1.41
RFX1P22670 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFX1P22670 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFX1P22670 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.24□□□□□ -1.41
RFX1P22670 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 AC024619.4-201ENST00000580924 316 ntBASIC6.24□□□□□ -1.41
RFX1P22670 MIR4260-201ENST00000583107 67 ntBASIC6.24□□□□□ -1.41
RFX1P22670 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.24□□□□□ -1.41
RFX1P22670 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.24□□□□□ -1.41
RFX1P22670 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX1P22670 AL133215.3-201ENST00000609801 448 ntBASIC6.24□□□□□ -1.41
RFX1P22670 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.24□□□□□ -1.41
RFX1P22670 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.24□□□□□ -1.41
RFX1P22670 AC018445.2-201ENST00000622987 260 ntBASIC6.24□□□□□ -1.41
RFX1P22670 CYP4F35P-202ENST00000636121 390 ntBASIC6.24□□□□□ -1.41
RFX1P22670 AC092070.2-203ENST00000598377 3644 ntBASIC6.24□□□□□ -1.41
RFX1P22670 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFX1P22670 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFX1P22670 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.24□□□□□ -1.41
RFX1P22670 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RFX1P22670 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFX1P22670 AC000374.1-201ENST00000434698 1745 ntBASIC6.24□□□□□ -1.41
RFX1P22670 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RFX1P22670 OR13C1P-202ENST00000641378 2919 ntBASIC6.24□□□□□ -1.41
RFX1P22670 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFX1P22670 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RFX1P22670 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RFX1P22670 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFX1P22670 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX1P22670 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX1P22670 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFX1P22670 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFX1P22670 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFX1P22670 AC121333.1-201ENST00000567488 2709 ntBASIC6.23□□□□□ -1.41
RFX1P22670 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFX1P22670 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RFX1P22670 AP004607.3-201ENST00000530354 3915 ntBASIC6.23□□□□□ -1.41
RFX1P22670 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RFX1P22670 AL354868.1-201ENST00000417077 482 ntBASIC6.23□□□□□ -1.41
RFX1P22670 AC068533.1-201ENST00000418542 415 ntBASIC6.23□□□□□ -1.41
RFX1P22670 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.23□□□□□ -1.41
RFX1P22670 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.23□□□□□ -1.41
RFX1P22670 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.23□□□□□ -1.41
RFX1P22670 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RFX1P22670 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX1P22670 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX1P22670 RPL21P133-201ENST00000443666 476 ntBASIC6.23□□□□□ -1.41
RFX1P22670 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.23□□□□□ -1.41
RFX1P22670 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.23□□□□□ -1.41
RFX1P22670 MTND4P7-201ENST00000523876 130 ntBASIC6.23□□□□□ -1.41
RFX1P22670 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.23□□□□□ -1.41
RFX1P22670 AC020661.2-201ENST00000560114 134 ntBASIC6.23□□□□□ -1.41
RFX1P22670 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.23□□□□□ -1.41
RFX1P22670 AL669831.4-202ENST00000590817 238 ntBASIC6.23□□□□□ -1.41
RFX1P22670 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.23□□□□□ -1.41
RFX1P22670 AL008729.2-201ENST00000606393 473 ntBASIC6.23□□□□□ -1.41
RFX1P22670 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.23□□□□□ -1.41
RFX1P22670 AC037198.3-201ENST00000616754 526 ntBASIC6.23□□□□□ -1.41
RFX1P22670 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.23□□□□□ -1.41
RFX1P22670 AC055839.1-201ENST00000634467 498 ntBASIC6.23□□□□□ -1.41
RFX1P22670 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX1P22670 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFX1P22670 AL137003.2-201ENST00000606924 2538 ntBASIC6.23□□□□□ -1.41
RFX1P22670 AC108751.5-201ENST00000492880 1336 ntBASIC6.23□□□□□ -1.41
RFX1P22670 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFX1P22670 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFX1P22670 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFX1P22670 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms