Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFRAP16234 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFRAP16234 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PDGFRAP16234 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.9□□□□□ -1.78
PDGFRAP16234 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PDGFRAP16234 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PDGFRAP16234 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PDGFRAP16234 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
PDGFRAP16234 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PDGFRAP16234 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PDGFRAP16234 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFRAP16234 AL359837.1-201ENST00000381357 287 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 Y_RNA.472-201ENST00000384322 102 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 MIR506-201ENST00000384998 124 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PDGFRAP16234 RPL23AP47-201ENST00000408017 460 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.9□□□□□ -1.79
PDGFRAP16234 RNU2-28P-201ENST00000410457 189 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFRAP16234 AC106883.1-201ENST00000418805 562 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFRAP16234 AL139247.1-201ENST00000422768 325 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFRAP16234 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFRAP16234 AL035410.1-201ENST00000427409 427 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AC018644.1-201ENST00000429934 551 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 NPM1P49-201ENST00000448027 714 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFRAP16234 NANOGP10-201ENST00000453325 895 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFRAP16234 ACTR3P3-201ENST00000480448 893 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFRAP16234 UBE2V1P12-201ENST00000503954 474 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFRAP16234 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFRAP16234 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.9□□□□□ -1.79
PDGFRAP16234 MIR2114-201ENST00000516645 80 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFRAP16234 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFRAP16234 OR10V3P-201ENST00000525712 725 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AL121766.1-201ENST00000547436 487 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 MTCYBP23-201ENST00000558717 1102 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFRAP16234 AL133457.1-201ENST00000564251 987 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.9□□□□□ -1.79
PDGFRAP16234 AL669831.4-202ENST00000590817 238 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.9□□□□□ -1.79
PDGFRAP16234 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFRAP16234 AL160237.3-201ENST00000604114 1013 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AC005332.6-201ENST00000613178 446 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 AC073968.1-201ENST00000618594 637 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFRAP16234 AC009318.4-201ENST00000620496 486 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFRAP16234 AC039056.2-201ENST00000622261 511 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 CR392039.5-201ENST00000623201 510 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFRAP16234 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
PDGFRAP16234 OTUD4P1-201ENST00000237841 3067 ntBASIC3.9□□□□□ -1.79
PDGFRAP16234 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFRAP16234 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFRAP16234 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFRAP16234 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFRAP16234 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFRAP16234 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFRAP16234 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFRAP16234 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFRAP16234 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFRAP16234 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFRAP16234 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFRAP16234 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PDGFRAP16234 Y_RNA.493-201ENST00000384422 102 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 SNORA48.7-201ENST00000391302 135 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 AL121972.1-201ENST00000402023 252 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 AL024474.1-201ENST00000404655 591 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 FNDC3CP-201ENST00000420795 1155 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 RPL21P109-201ENST00000422213 475 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.89□□□□□ -1.79
PDGFRAP16234 AC006548.1-201ENST00000427470 102 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 MOB1AP1-201ENST00000430903 535 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 RPL21P112-201ENST00000434403 463 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 OR10R1P-201ENST00000441524 1141 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFRAP16234 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFRAP16234 RNU7-170P-201ENST00000459303 61 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 AL133162.1-201ENST00000463228 453 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 AC007537.2-201ENST00000472093 511 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 NCOR1P1-202ENST00000486162 291 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFRAP16234 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFRAP16234 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.89□□□□□ -1.79
PDGFRAP16234 OR7E13P-201ENST00000526052 910 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.89□□□□□ -1.79
PDGFRAP16234 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.89□□□□□ -1.79
PDGFRAP16234 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.89□□□□□ -1.79
PDGFRAP16234 AC138915.2-201ENST00000569776 97 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 MIR5187-201ENST00000583479 76 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 AL035411.2-201ENST00000604022 421 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms