Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AL136981.2-201ENST00000617319 734 ntBASIC2.06□□□□□ -2.08
ACANP16112 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.06□□□□□ -2.08
ACANP16112 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.06□□□□□ -2.08
ACANP16112 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.06□□□□□ -2.08
ACANP16112 AL356292.1-201ENST00000283110 373 ntBASIC2.06□□□□□ -2.08
ACANP16112 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.06□□□□□ -2.08
ACANP16112 OR2AS1P-201ENST00000427827 319 ntBASIC2.06□□□□□ -2.08
ACANP16112 RPL23AP22-201ENST00000437556 453 ntBASIC2.06□□□□□ -2.08
ACANP16112 RN7SL633P-201ENST00000488974 297 ntBASIC2.06□□□□□ -2.08
ACANP16112 AC108078.3-201ENST00000502633 489 ntBASIC2.06□□□□□ -2.08
ACANP16112 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.06□□□□□ -2.08
ACANP16112 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.06□□□□□ -2.08
ACANP16112 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.06□□□□□ -2.08
ACANP16112 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.06□□□□□ -2.08
ACANP16112 AC010198.2-201ENST00000550612 259 ntBASIC2.06□□□□□ -2.08
ACANP16112 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.06□□□□□ -2.08
ACANP16112 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.06□□□□□ -2.08
ACANP16112 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.06□□□□□ -2.08
ACANP16112 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.06□□□□□ -2.08
ACANP16112 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ACANP16112 AC107081.3-201ENST00000612715 2034 ntBASIC2.05□□□□□ -2.08
ACANP16112 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.05□□□□□ -2.08
ACANP16112 AC107027.3-201ENST00000565095 3473 ntBASIC2.05□□□□□ -2.08
ACANP16112 EI24P2-201ENST00000397776 1076 ntBASIC2.05□□□□□ -2.08
ACANP16112 ZNF603P-201ENST00000405613 487 ntBASIC2.05□□□□□ -2.08
ACANP16112 RNA5SP107-201ENST00000411358 122 ntBASIC2.05□□□□□ -2.08
ACANP16112 CYCSP49-201ENST00000420810 319 ntBASIC2.05□□□□□ -2.08
ACANP16112 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.05□□□□□ -2.08
ACANP16112 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ACANP16112 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.05□□□□□ -2.08
ACANP16112 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.05□□□□□ -2.08
ACANP16112 AC011753.1-201ENST00000451001 220 ntBASIC2.05□□□□□ -2.08
ACANP16112 MTCO3P11-201ENST00000455103 774 ntBASIC2.05□□□□□ -2.08
ACANP16112 RPL30P9-201ENST00000465586 330 ntBASIC2.05□□□□□ -2.08
ACANP16112 AC104027.1-201ENST00000521887 300 ntBASIC2.05□□□□□ -2.08
ACANP16112 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
ACANP16112 RANP3-201ENST00000530970 276 ntBASIC2.05□□□□□ -2.08
ACANP16112 OR5BN1P-201ENST00000532955 829 ntBASIC2.05□□□□□ -2.08
ACANP16112 GNAI2P1-201ENST00000541815 315 ntBASIC2.05□□□□□ -2.08
ACANP16112 AC244517.3-201ENST00000616254 1235 ntBASIC2.05□□□□□ -2.08
ACANP16112 MIR6873-201ENST00000622788 63 ntBASIC2.05□□□□□ -2.08
ACANP16112 CR381653.2-201ENST00000624041 768 ntBASIC2.05□□□□□ -2.08
ACANP16112 AC063952.1-203ENST00000634410 658 ntBASIC2.05□□□□□ -2.08
ACANP16112 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ACANP16112 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
ACANP16112 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.05□□□□□ -2.08
ACANP16112 GABPAP-201ENST00000419271 1356 ntBASIC2.05□□□□□ -2.08
ACANP16112 RNY1P10-201ENST00000363268 113 ntBASIC2.05□□□□□ -2.08
ACANP16112 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ACANP16112 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.05□□□□□ -2.08
ACANP16112 AC010881.1-201ENST00000433830 235 ntBASIC2.05□□□□□ -2.08
ACANP16112 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.05□□□□□ -2.08
ACANP16112 AC006539.3-201ENST00000454258 129 ntBASIC2.05□□□□□ -2.08
ACANP16112 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
ACANP16112 AC026436.1-201ENST00000510537 270 ntBASIC2.05□□□□□ -2.08
ACANP16112 AC100870.1-201ENST00000522035 505 ntBASIC2.05□□□□□ -2.08
ACANP16112 Z82195.1-201ENST00000604558 398 ntBASIC2.05□□□□□ -2.08
ACANP16112 AL355493.4-201ENST00000618530 292 ntBASIC2.05□□□□□ -2.08
ACANP16112 AC090897.3-201ENST00000636973 1157 ntBASIC2.05□□□□□ -2.08
ACANP16112 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
ACANP16112 ADAM3A-203ENST00000461344 2157 ntBASIC2.04□□□□□ -2.08
ACANP16112 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC2.04□□□□□ -2.08
ACANP16112 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.04□□□□□ -2.08
ACANP16112 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ACANP16112 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
ACANP16112 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ACANP16112 LAP3P1-201ENST00000403648 294 ntBASIC2.04□□□□□ -2.08
ACANP16112 AC011816.1-201ENST00000441346 546 ntBASIC2.04□□□□□ -2.08
ACANP16112 RPL23AP16-201ENST00000441715 421 ntBASIC2.04□□□□□ -2.08
ACANP16112 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.04□□□□□ -2.08
ACANP16112 ST13P14-201ENST00000474095 734 ntBASIC2.04□□□□□ -2.08
ACANP16112 AC106872.3-201ENST00000495104 446 ntBASIC2.04□□□□□ -2.08
ACANP16112 SNORA64.4-201ENST00000516632 81 ntBASIC2.04□□□□□ -2.08
ACANP16112 CKS1BP7-201ENST00000522230 235 ntBASIC2.04□□□□□ -2.08
ACANP16112 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.04□□□□□ -2.08
ACANP16112 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.04□□□□□ -2.08
ACANP16112 AC141257.3-201ENST00000572906 215 ntBASIC2.04□□□□□ -2.08
ACANP16112 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.04□□□□□ -2.08
ACANP16112 AC011494.1-201ENST00000596454 237 ntBASIC2.04□□□□□ -2.08
ACANP16112 LINC00901.1-201ENST00000617252 152 ntBASIC2.04□□□□□ -2.08
ACANP16112 AC079298.2-201ENST00000623885 459 ntBASIC2.04□□□□□ -2.08
ACANP16112 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.04□□□□□ -2.08
ACANP16112 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ACANP16112 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ACANP16112 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
ACANP16112 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ACANP16112 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ACANP16112 RNU1-17P-201ENST00000363022 152 ntBASIC2.03□□□□□ -2.08
ACANP16112 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.03□□□□□ -2.08
ACANP16112 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.03□□□□□ -2.08
ACANP16112 ARL2BPP6-201ENST00000512757 439 ntBASIC2.03□□□□□ -2.08
ACANP16112 Y_RNA.670-201ENST00000516255 105 ntBASIC2.03□□□□□ -2.08
ACANP16112 TRAV11-201ENST00000539512 339 ntBASIC2.03□□□□□ -2.08
ACANP16112 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.03□□□□□ -2.08
ACANP16112 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.03□□□□□ -2.08
ACANP16112 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.03□□□□□ -2.08
ACANP16112 AC008277.2-201ENST00000605196 797 ntBASIC2.03□□□□□ -2.08
ACANP16112 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
ACANP16112 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.03□□□□□ -2.08
ACANP16112 FAM35DP-201ENST00000323387 2712 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms