Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP2AP11388 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TOP2AP11388 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TOP2AP11388 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TOP2AP11388 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TOP2AP11388 MAPK10-322ENST00000641485 4530 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.26□□□□□ -1.73
TOP2AP11388 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TOP2AP11388 RPL21P132-201ENST00000331267 462 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP2AP11388 EIF5P1-201ENST00000400019 1231 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP2AP11388 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP2AP11388 AC106872.2-201ENST00000494303 480 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP2AP11388 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.26□□□□□ -1.73
TOP2AP11388 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.26□□□□□ -1.73
TOP2AP11388 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TOP2AP11388 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TOP2AP11388 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP2AP11388 AL162578.1-201ENST00000406202 378 ntBASIC4.25□□□□□ -1.73
TOP2AP11388 RN7SKP140-201ENST00000411196 284 ntBASIC4.25□□□□□ -1.73
TOP2AP11388 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.25□□□□□ -1.73
TOP2AP11388 AC099063.2-201ENST00000446360 662 ntBASIC4.25□□□□□ -1.73
TOP2AP11388 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.25□□□□□ -1.73
TOP2AP11388 RPL30P9-201ENST00000465586 330 ntBASIC4.25□□□□□ -1.73
TOP2AP11388 AC008837.1-201ENST00000511513 412 ntBASIC4.25□□□□□ -1.73
TOP2AP11388 RNA5SP281-201ENST00000516504 135 ntBASIC4.25□□□□□ -1.73
TOP2AP11388 AC009977.1-201ENST00000586015 570 ntBASIC4.25□□□□□ -1.73
TOP2AP11388 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TOP2AP11388 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TOP2AP11388 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP2AP11388 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TOP2AP11388 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TOP2AP11388 CYCSP45-201ENST00000402289 315 ntBASIC4.24□□□□□ -1.73
TOP2AP11388 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.24□□□□□ -1.73
TOP2AP11388 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TOP2AP11388 AC147055.1-201ENST00000509261 750 ntBASIC4.24□□□□□ -1.73
TOP2AP11388 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TOP2AP11388 SEC11B-201ENST00000518383 499 ntBASIC4.24□□□□□ -1.73
TOP2AP11388 AP000867.2-201ENST00000532468 320 ntBASIC4.24□□□□□ -1.73
TOP2AP11388 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.24□□□□□ -1.73
TOP2AP11388 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TOP2AP11388 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.24□□□□□ -1.73
TOP2AP11388 KC877982.1-201ENST00000602313 470 ntBASIC4.24□□□□□ -1.73
TOP2AP11388 AC046143.2-201ENST00000609789 160 ntBASIC4.24□□□□□ -1.73
TOP2AP11388 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.24□□□□□ -1.73
TOP2AP11388 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.24□□□□□ -1.73
TOP2AP11388 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TOP2AP11388 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TOP2AP11388 AL513477.1-202ENST00000417061 214 ntBASIC4.23□□□□□ -1.73
TOP2AP11388 PTP4A1P5-201ENST00000420305 455 ntBASIC4.23□□□□□ -1.73
TOP2AP11388 DPH3P2-201ENST00000422618 250 ntBASIC4.23□□□□□ -1.73
TOP2AP11388 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP2AP11388 AC104058.1-201ENST00000448028 297 ntBASIC4.23□□□□□ -1.73
TOP2AP11388 AC103975.1-201ENST00000482506 483 ntBASIC4.23□□□□□ -1.73
TOP2AP11388 LINC00888-204ENST00000487386 421 ntBASIC4.23□□□□□ -1.73
TOP2AP11388 AC092436.1-201ENST00000506450 503 ntBASIC4.23□□□□□ -1.73
TOP2AP11388 ACTR6P1-201ENST00000514311 1104 ntBASIC4.23□□□□□ -1.73
TOP2AP11388 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.23□□□□□ -1.73
TOP2AP11388 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.23□□□□□ -1.73
TOP2AP11388 BMS1P7-201ENST00000602440 1052 ntBASIC4.23□□□□□ -1.73
TOP2AP11388 NF1P10-201ENST00000613227 742 ntBASIC4.23□□□□□ -1.73
TOP2AP11388 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.23□□□□□ -1.73
TOP2AP11388 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TOP2AP11388 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.23□□□□□ -1.73
TOP2AP11388 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.22□□□□□ -1.73
TOP2AP11388 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TOP2AP11388 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.22□□□□□ -1.73
TOP2AP11388 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.22□□□□□ -1.73
TOP2AP11388 AP001086.1-201ENST00000494882 321 ntBASIC4.22□□□□□ -1.73
TOP2AP11388 AC021269.2-201ENST00000532318 330 ntBASIC4.22□□□□□ -1.73
TOP2AP11388 NTAN1P1-201ENST00000603150 646 ntBASIC4.22□□□□□ -1.73
TOP2AP11388 AL354950.1-201ENST00000614150 568 ntBASIC4.22□□□□□ -1.73
TOP2AP11388 AC004696.1-201ENST00000614345 607 ntBASIC4.22□□□□□ -1.73
TOP2AP11388 AL162233.1-201ENST00000620014 944 ntBASIC4.22□□□□□ -1.73
TOP2AP11388 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.22□□□□□ -1.73
TOP2AP11388 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TOP2AP11388 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
TOP2AP11388 AC007064.1-201ENST00000412238 351 ntBASIC4.21□□□□□ -1.73
TOP2AP11388 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.21□□□□□ -1.73
TOP2AP11388 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.21□□□□□ -1.73
TOP2AP11388 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.21□□□□□ -1.73
TOP2AP11388 AC133134.1-201ENST00000466800 359 ntBASIC4.21□□□□□ -1.73
TOP2AP11388 RPL9P6-201ENST00000492764 598 ntBASIC4.21□□□□□ -1.73
TOP2AP11388 OR4G11P-201ENST00000492842 939 ntBASIC4.21□□□□□ -1.73
TOP2AP11388 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
TOP2AP11388 OR7K1P-201ENST00000546439 926 ntBASIC4.21□□□□□ -1.73
TOP2AP11388 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.21□□□□□ -1.73
TOP2AP11388 DEFB122-202ENST00000569013 197 ntBASIC4.21□□□□□ -1.73
TOP2AP11388 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC4.21□□□□□ -1.73
TOP2AP11388 AC107871.2-201ENST00000612894 502 ntBASIC4.21□□□□□ -1.73
TOP2AP11388 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TOP2AP11388 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TOP2AP11388 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC4.21□□□□□ -1.74
TOP2AP11388 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TOP2AP11388 AC018634.1-201ENST00000437554 401 ntBASIC4.21□□□□□ -1.74
TOP2AP11388 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms