Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC007318.2-201ENST00000620999 243 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CXCL1P09341 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
CXCL1P09341 ZNF285B-201ENST00000561698 1767 ntBASIC2.26□□□□□ -2.05
CXCL1P09341 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CXCL1P09341 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.25□□□□□ -2.05
CXCL1P09341 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.25□□□□□ -2.05
CXCL1P09341 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL1P09341 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL1P09341 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL1P09341 SNORA7.4-201ENST00000384249 137 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 U3.42-201ENST00000408746 214 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.25□□□□□ -2.05
CXCL1P09341 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.25□□□□□ -2.05
CXCL1P09341 USP9YP36-201ENST00000424581 829 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.25□□□□□ -2.05
CXCL1P09341 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.25□□□□□ -2.05
CXCL1P09341 C4BPAP2-201ENST00000428434 478 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.25□□□□□ -2.05
CXCL1P09341 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.25□□□□□ -2.05
CXCL1P09341 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.25□□□□□ -2.05
CXCL1P09341 HSPD1P21-201ENST00000436541 245 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 RPL23AP74-201ENST00000437246 471 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL1P09341 HMGB1P25-201ENST00000468402 607 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 AC126121.1-201ENST00000482313 553 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 AC021087.2-201ENST00000504656 1203 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.25□□□□□ -2.05
CXCL1P09341 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.25□□□□□ -2.05
CXCL1P09341 COX6B1P6-201ENST00000522347 255 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.25□□□□□ -2.05
CXCL1P09341 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.25□□□□□ -2.05
CXCL1P09341 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.25□□□□□ -2.05
CXCL1P09341 AC104237.2-201ENST00000612456 443 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 AC100793.4-201ENST00000613683 429 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL1P09341 AL355365.1-201ENST00000616480 294 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 AL355493.4-201ENST00000618530 292 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 AL121594.5-201ENST00000631724 573 ntBASIC2.25□□□□□ -2.05
CXCL1P09341 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CXCL1P09341 ZNF271P-202ENST00000465539 1970 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 AC073325.2-201ENST00000339545 159 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 SNORA14A-201ENST00000364773 135 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 RNU1-109P-201ENST00000383960 147 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 SNORD15B-201ENST00000384714 146 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CXCL1P09341 TAF9BP1-201ENST00000396646 746 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 AL121972.1-201ENST00000402023 252 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 RAP1BP1-201ENST00000412709 553 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 LINC01881-201ENST00000416103 412 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.24□□□□□ -2.05
CXCL1P09341 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.24□□□□□ -2.05
CXCL1P09341 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.24□□□□□ -2.05
CXCL1P09341 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL1P09341 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.24□□□□□ -2.05
CXCL1P09341 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL1P09341 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.24□□□□□ -2.05
CXCL1P09341 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL1P09341 AL445669.2-201ENST00000454425 421 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 snoU13.3-201ENST00000459441 104 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 AC109925.1-201ENST00000478069 331 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 RPS29P2-201ENST00000479278 136 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.24□□□□□ -2.05
CXCL1P09341 RPS27P27-201ENST00000498779 255 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CXCL1P09341 AC021678.1-201ENST00000505195 936 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL1P09341 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL1P09341 OR5B10P-201ENST00000532869 642 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL1P09341 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL1P09341 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.24□□□□□ -2.05
CXCL1P09341 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL1P09341 AL355836.1-201ENST00000555951 870 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 RPL21P12-201ENST00000559810 515 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL1P09341 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL1P09341 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
CXCL1P09341 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.24□□□□□ -2.05
CXCL1P09341 AC006130.2-201ENST00000586202 326 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.24□□□□□ -2.05
CXCL1P09341 CKS1BP3-201ENST00000600888 237 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
CXCL1P09341 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.24□□□□□ -2.05
CXCL1P09341 AC105227.2-201ENST00000615075 605 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.24□□□□□ -2.05
CXCL1P09341 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CXCL1P09341 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.24□□□□□ -2.05
CXCL1P09341 AP003122.6-201ENST00000623831 495 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 AC009039.2-201ENST00000624524 529 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 AP000676.4-201ENST00000624659 623 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC2.24□□□□□ -2.05
CXCL1P09341 FO624990.1-201ENST00000636373 85 ntBASIC2.24□□□□□ -2.05
CXCL1P09341 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.24□□□□□ -2.05
CXCL1P09341 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CXCL1P09341 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CXCL1P09341 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CXCL1P09341 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.24□□□□□ -2.05
CXCL1P09341 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CXCL1P09341 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms