Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC4P09017 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC4P09017 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 SEPT7P7-201ENST00000420492 1301 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 RNA5SP197-201ENST00000363357 119 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
HOXC4P09017 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 RNU6-584P-201ENST00000410350 95 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AL024507.1-201ENST00000412741 274 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AC126124.2-201ENST00000413542 321 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC4P09017 RPL31P12-201ENST00000422587 358 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 MTCO2P23-201ENST00000425216 680 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 PTP4A1P3-201ENST00000433661 420 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC4P09017 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC4P09017 HMGB1P48-201ENST00000446155 598 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC4P09017 AL096829.2-201ENST00000446582 742 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 Z75741.1-201ENST00000446793 314 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 RPL29P29-201ENST00000448725 423 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 RPL32P14-201ENST00000463196 378 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AC104982.1-201ENST00000478775 574 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AC020893.1-201ENST00000502452 580 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 PRELID3BP6-201ENST00000503839 571 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AC021678.1-201ENST00000505195 936 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AC026427.2-201ENST00000506228 536 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AC114322.1-201ENST00000506771 926 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC4P09017 PTGES3P3-201ENST00000511479 482 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 RN7SKP116-201ENST00000516902 319 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 RN7SKP57-201ENST00000517248 293 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AC107934.2-201ENST00000518653 310 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.27□□□□□ -1.89
HOXC4P09017 CIR1P1-201ENST00000524055 1133 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 HIGD1AP1-201ENST00000550979 275 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC4P09017 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HOXC4P09017 AC017100.2-201ENST00000584628 355 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.27□□□□□ -1.89
HOXC4P09017 AC026741.1-201ENST00000605892 482 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC4P09017 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 MIR8057-201ENST00000620957 69 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC4P09017 FAM157B-203ENST00000639350 358 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 XPOTP1-201ENST00000443317 2398 ntBASIC3.27□□□□□ -1.89
HOXC4P09017 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC4P09017 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC4P09017 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HOXC4P09017 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC4P09017 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC4P09017 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC4P09017 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC4P09017 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
HOXC4P09017 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC4P09017 RNA5SP167-201ENST00000365461 116 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXC4P09017 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC4P09017 AC114973.1-201ENST00000429057 632 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC4P09017 UBE2V1P1-201ENST00000430836 445 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC4P09017 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC4P09017 ELOCP23-201ENST00000452014 332 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC4P09017 AC109925.1-201ENST00000478069 331 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 RPL7P38-201ENST00000488396 739 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 RPL5P23-201ENST00000496040 868 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 AC096571.1-202ENST00000506634 735 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC4P09017 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXC4P09017 AC008494.2-201ENST00000514544 370 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC4P09017 AP003066.2-201ENST00000529375 555 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXC4P09017 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC4P09017 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC4P09017 MTND1P24-201ENST00000552175 861 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC4P09017 AC009712.1-201ENST00000564938 316 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC4P09017 AC011492.1-201ENST00000600023 315 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 CLIC4P2-201ENST00000601934 717 ntBASIC3.26□□□□□ -1.89
HOXC4P09017 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC4P09017 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC4P09017 AL157817.1-201ENST00000614264 790 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms