Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TPM3P06753 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.32□□□□□ -1.88
TPM3P06753 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TPM3P06753 METTL21EP-201ENST00000298105 713 ntBASIC3.32□□□□□ -1.88
TPM3P06753 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TPM3P06753 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TPM3P06753 RNU1-109P-201ENST00000383960 147 ntBASIC3.32□□□□□ -1.88
TPM3P06753 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TPM3P06753 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.32□□□□□ -1.88
TPM3P06753 AL591034.1-201ENST00000407447 340 ntBASIC3.32□□□□□ -1.88
TPM3P06753 RN7SKP202-201ENST00000410439 330 ntBASIC3.32□□□□□ -1.88
TPM3P06753 AC233728.2-201ENST00000425348 757 ntBASIC3.32□□□□□ -1.88
TPM3P06753 RPL37P1-201ENST00000432310 284 ntBASIC3.32□□□□□ -1.88
TPM3P06753 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.32□□□□□ -1.88
TPM3P06753 RPL36AP6-201ENST00000435770 321 ntBASIC3.32□□□□□ -1.88
TPM3P06753 ELOCP13-201ENST00000443934 329 ntBASIC3.32□□□□□ -1.88
TPM3P06753 H2AFZP6-201ENST00000444403 394 ntBASIC3.32□□□□□ -1.88
TPM3P06753 AC016696.1-201ENST00000446949 318 ntBASIC3.32□□□□□ -1.88
TPM3P06753 RPL21P10-201ENST00000463521 490 ntBASIC3.32□□□□□ -1.88
TPM3P06753 AC109925.1-201ENST00000478069 331 ntBASIC3.32□□□□□ -1.88
TPM3P06753 RPS29P2-201ENST00000479278 136 ntBASIC3.32□□□□□ -1.88
TPM3P06753 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TPM3P06753 AL024509.2-201ENST00000493462 493 ntBASIC3.32□□□□□ -1.88
TPM3P06753 RPL21P131-201ENST00000497298 483 ntBASIC3.32□□□□□ -1.88
TPM3P06753 AC111193.1-201ENST00000504097 155 ntBASIC3.32□□□□□ -1.88
TPM3P06753 HMGB1P22-201ENST00000505315 124 ntBASIC3.32□□□□□ -1.88
TPM3P06753 AP004371.1-201ENST00000525240 214 ntBASIC3.32□□□□□ -1.88
TPM3P06753 AC109635.4-202ENST00000531666 412 ntBASIC3.32□□□□□ -1.88
TPM3P06753 AC090751.1-201ENST00000566966 267 ntBASIC3.32□□□□□ -1.88
TPM3P06753 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.32□□□□□ -1.88
TPM3P06753 AC113368.1-201ENST00000603736 382 ntBASIC3.32□□□□□ -1.88
TPM3P06753 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.32□□□□□ -1.88
TPM3P06753 PABPC1P7-201ENST00000413177 1513 ntBASIC3.32□□□□□ -1.88
TPM3P06753 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.32□□□□□ -1.88
TPM3P06753 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.32□□□□□ -1.88
TPM3P06753 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TPM3P06753 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.32□□□□□ -1.88
TPM3P06753 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TPM3P06753 AC009487.2-201ENST00000420969 6821 ntBASIC3.31□□□□□ -1.88
TPM3P06753 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.31□□□□□ -1.88
TPM3P06753 ZNF37BP-203ENST00000452306 1352 ntBASIC3.31□□□□□ -1.88
TPM3P06753 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TPM3P06753 RNU1-35P-201ENST00000362782 153 ntBASIC3.31□□□□□ -1.88
TPM3P06753 SNORA7.4-201ENST00000384249 137 ntBASIC3.31□□□□□ -1.88
TPM3P06753 MTND4P13-201ENST00000402078 1023 ntBASIC3.31□□□□□ -1.88
TPM3P06753 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.31□□□□□ -1.88
TPM3P06753 AC018644.1-201ENST00000429934 551 ntBASIC3.31□□□□□ -1.88
TPM3P06753 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.31□□□□□ -1.88
TPM3P06753 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.31□□□□□ -1.88
TPM3P06753 RPL6P5-201ENST00000445678 828 ntBASIC3.31□□□□□ -1.88
TPM3P06753 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.31□□□□□ -1.88
TPM3P06753 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
TPM3P06753 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.31□□□□□ -1.88
TPM3P06753 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.31□□□□□ -1.88
TPM3P06753 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.31□□□□□ -1.88
TPM3P06753 AC111000.2-201ENST00000507775 550 ntBASIC3.31□□□□□ -1.88
TPM3P06753 AC008494.2-201ENST00000514544 370 ntBASIC3.31□□□□□ -1.88
TPM3P06753 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.31□□□□□ -1.88
TPM3P06753 AC004923.2-201ENST00000529649 369 ntBASIC3.31□□□□□ -1.88
TPM3P06753 AC125611.2-201ENST00000551907 647 ntBASIC3.31□□□□□ -1.88
TPM3P06753 AC009303.3-201ENST00000591103 736 ntBASIC3.31□□□□□ -1.88
TPM3P06753 IGHV3-29-201ENST00000604817 344 ntBASIC3.31□□□□□ -1.88
TPM3P06753 AL590282.1-201ENST00000610379 1136 ntBASIC3.31□□□□□ -1.88
TPM3P06753 U73479.1-201ENST00000618062 168 ntBASIC3.31□□□□□ -1.88
TPM3P06753 AP003122.6-201ENST00000623831 495 ntBASIC3.31□□□□□ -1.88
TPM3P06753 AC090897.3-201ENST00000636973 1157 ntBASIC3.31□□□□□ -1.88
TPM3P06753 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
TPM3P06753 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TPM3P06753 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TPM3P06753 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.3□□□□□ -1.88
TPM3P06753 RNU1-33P-201ENST00000364249 162 ntBASIC3.3□□□□□ -1.88
TPM3P06753 RNU6-629P-201ENST00000384061 103 ntBASIC3.3□□□□□ -1.88
TPM3P06753 SNORA57.1-201ENST00000391227 145 ntBASIC3.3□□□□□ -1.88
TPM3P06753 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TPM3P06753 MIR1289-1-201ENST00000408836 144 ntBASIC3.3□□□□□ -1.88
TPM3P06753 RNU4-65P-201ENST00000410473 140 ntBASIC3.3□□□□□ -1.88
TPM3P06753 RPS7P15-201ENST00000415804 584 ntBASIC3.3□□□□□ -1.88
TPM3P06753 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.3□□□□□ -1.88
TPM3P06753 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.3□□□□□ -1.88
TPM3P06753 AC011242.1-201ENST00000433596 1158 ntBASIC3.3□□□□□ -1.88
TPM3P06753 Z96811.1-201ENST00000445880 108 ntBASIC3.3□□□□□ -1.88
TPM3P06753 AL445669.2-201ENST00000454425 421 ntBASIC3.3□□□□□ -1.88
TPM3P06753 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.3□□□□□ -1.88
TPM3P06753 RN7SL863P-201ENST00000462370 296 ntBASIC3.3□□□□□ -1.88
TPM3P06753 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.3□□□□□ -1.88
TPM3P06753 AC126121.1-201ENST00000482313 553 ntBASIC3.3□□□□□ -1.88
TPM3P06753 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.3□□□□□ -1.88
TPM3P06753 AC104687.1-201ENST00000485829 412 ntBASIC3.3□□□□□ -1.88
TPM3P06753 PRELID3BP6-201ENST00000503839 571 ntBASIC3.3□□□□□ -1.88
TPM3P06753 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.3□□□□□ -1.88
TPM3P06753 RNA5SP468-201ENST00000516782 93 ntBASIC3.3□□□□□ -1.88
TPM3P06753 OR4A45P-201ENST00000529954 901 ntBASIC3.3□□□□□ -1.88
TPM3P06753 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.3□□□□□ -1.88
TPM3P06753 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.3□□□□□ -1.88
TPM3P06753 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TPM3P06753 AC005242.1-201ENST00000585658 438 ntBASIC3.3□□□□□ -1.88
TPM3P06753 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.3□□□□□ -1.88
TPM3P06753 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.3□□□□□ -1.88
TPM3P06753 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
TPM3P06753 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms