Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC115115.1-201ENST00000449927 248 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 ELOCP23-201ENST00000452014 332 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 MRPL35P4-201ENST00000453682 566 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 AC008155.2-201ENST00000464337 397 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 AL672167.3-201ENST00000465951 960 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 RPS26P21-201ENST00000475397 348 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SEMA3DO95025 HMGB1P38-201ENST00000490557 577 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 AC008565.1-201ENST00000509046 885 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.1□□□□□ -1.91
SEMA3DO95025 SETP12-201ENST00000514068 805 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.1□□□□□ -1.91
SEMA3DO95025 RNU1-61P-201ENST00000516107 151 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 RN7SKP277-201ENST00000516895 283 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.1□□□□□ -1.91
SEMA3DO95025 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.1□□□□□ -1.91
SEMA3DO95025 AC245166.1-201ENST00000521012 253 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 AP001207.1-201ENST00000524051 481 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SEMA3DO95025 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.1□□□□□ -1.91
SEMA3DO95025 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.1□□□□□ -1.91
SEMA3DO95025 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.1□□□□□ -1.91
SEMA3DO95025 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.1□□□□□ -1.91
SEMA3DO95025 AC015967.1-201ENST00000619893 476 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SEMA3DO95025 AC073055.1-201ENST00000456901 1621 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SEMA3DO95025 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 AP001350.1-201ENST00000601906 1524 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 RNA5SP119-201ENST00000362715 117 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.09□□□□□ -1.91
SEMA3DO95025 RPL21P3-201ENST00000395517 478 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 RPL5P18-201ENST00000406671 891 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.09□□□□□ -1.91
SEMA3DO95025 BX323014.1-201ENST00000412876 237 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 AL158825.1-201ENST00000414735 521 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 HSPE1P1-201ENST00000421494 318 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 FAM204CP-201ENST00000424489 642 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.09□□□□□ -1.91
SEMA3DO95025 RNFT1P2-201ENST00000443064 757 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 HMGB1P48-201ENST00000446155 598 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 CYCSP35-201ENST00000451978 304 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 AC146507.2-201ENST00000460608 476 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.09□□□□□ -1.91
SEMA3DO95025 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.09□□□□□ -1.91
SEMA3DO95025 AC110794.1-201ENST00000505816 425 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.09□□□□□ -1.91
SEMA3DO95025 RNA5SP217-201ENST00000515959 91 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 RNU6-1102P-201ENST00000516149 96 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 AC083923.1-201ENST00000523708 376 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 MTND2P26-201ENST00000528255 1029 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.09□□□□□ -1.91
SEMA3DO95025 AC011611.1-201ENST00000552179 197 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.09□□□□□ -1.91
SEMA3DO95025 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.09□□□□□ -1.91
SEMA3DO95025 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.09□□□□□ -1.91
SEMA3DO95025 NCAPGP2-201ENST00000557911 754 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.09□□□□□ -1.91
SEMA3DO95025 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.09□□□□□ -1.91
SEMA3DO95025 AC079880.2-201ENST00000603790 1213 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 KATNBL1P5-201ENST00000605015 517 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 AL118556.2-201ENST00000614375 824 ntBASIC3.09□□□□□ -1.91
SEMA3DO95025 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.09□□□□□ -1.91
SEMA3DO95025 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SEMA3DO95025 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SEMA3DO95025 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
SEMA3DO95025 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SEMA3DO95025 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.08□□□□□ -1.92
SEMA3DO95025 AC016716.1-201ENST00000265882 708 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 ENSAP3-201ENST00000312710 333 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SEMA3DO95025 RNA5SP27-201ENST00000363839 119 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 RNA5SP44-201ENST00000410446 133 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.08□□□□□ -1.92
SEMA3DO95025 AC069157.1-201ENST00000421749 137 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SEMA3DO95025 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.08□□□□□ -1.92
SEMA3DO95025 RPL17P49-201ENST00000443728 411 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.08□□□□□ -1.92
SEMA3DO95025 NECAP1P2-201ENST00000455668 727 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 snoU13.7-201ENST00000459220 104 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 SNORA84-201ENST00000459229 133 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 AC126121.1-201ENST00000482313 553 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.08□□□□□ -1.92
SEMA3DO95025 OR5H3P-201ENST00000502817 919 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.08□□□□□ -1.92
SEMA3DO95025 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.08□□□□□ -1.92
SEMA3DO95025 AC118282.1-201ENST00000506408 765 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.08□□□□□ -1.92
SEMA3DO95025 RPL7L1P13-201ENST00000511702 739 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 AC119751.1-201ENST00000513357 765 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 RNU1-143P-201ENST00000516296 146 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 RNU6-711P-201ENST00000517255 106 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.08□□□□□ -1.92
SEMA3DO95025 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.08□□□□□ -1.92
SEMA3DO95025 AC010306.1-201ENST00000523223 1117 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 AC239860.2-201ENST00000525886 270 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms