Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.71□□□□□ -1.82
LMX1BO60663 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.71□□□□□ -1.82
LMX1BO60663 USP9YP35-201ENST00000435696 412 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 RPL23AP52-201ENST00000439311 478 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LMX1BO60663 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.71□□□□□ -1.82
LMX1BO60663 SUMO2P2-201ENST00000456482 255 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.71□□□□□ -1.82
LMX1BO60663 AC010469.1-201ENST00000463864 576 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 RPL5P30-201ENST00000465511 891 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 RPS4XP15-201ENST00000489210 795 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.71□□□□□ -1.82
LMX1BO60663 PRELID3BP7-201ENST00000503606 469 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.71□□□□□ -1.82
LMX1BO60663 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
LMX1BO60663 AC020593.1-201ENST00000507399 299 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.71□□□□□ -1.82
LMX1BO60663 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.71□□□□□ -1.82
LMX1BO60663 NRON-201ENST00000517270 370 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AF279873.1-201ENST00000523393 313 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.71□□□□□ -1.82
LMX1BO60663 AC016957.1-201ENST00000534895 309 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AC006064.5-201ENST00000541782 248 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.71□□□□□ -1.82
LMX1BO60663 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.71□□□□□ -1.82
LMX1BO60663 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.71□□□□□ -1.82
LMX1BO60663 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.71□□□□□ -1.82
LMX1BO60663 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.71□□□□□ -1.82
LMX1BO60663 AC136618.2-201ENST00000575091 400 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AL591034.3-201ENST00000605511 685 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AC008498.1-201ENST00000613012 531 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 LINC00901.1-201ENST00000617252 152 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AC092650.2-201ENST00000619984 902 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.71□□□□□ -1.82
LMX1BO60663 RNA5SP196-201ENST00000625967 102 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AC008013.2-202ENST00000637965 364 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 MIR492-201ENST00000638676 116 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LMX1BO60663 CDR1-202ENST00000625883 1485 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LMX1BO60663 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LMX1BO60663 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.7□□□□□ -1.82
LMX1BO60663 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
LMX1BO60663 CR383658.2-201ENST00000547576 1525 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LMX1BO60663 AC012020.1-201ENST00000624541 1728 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LMX1BO60663 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LMX1BO60663 SPRR2C-201ENST00000290702 219 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 FGF7P2-201ENST00000332473 296 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 RNU6-216P-201ENST00000363282 104 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 SNORD74.4-201ENST00000364129 80 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 RNA5SP175-201ENST00000364275 119 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 RNU1-13P-201ENST00000384499 162 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 RPL32P23-201ENST00000397237 405 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 EIF4A1P3-201ENST00000411521 244 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AC009302.1-201ENST00000417147 390 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 FNDC3CP-201ENST00000420795 1155 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.7□□□□□ -1.82
LMX1BO60663 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.7□□□□□ -1.82
LMX1BO60663 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.7□□□□□ -1.82
LMX1BO60663 AL512649.1-201ENST00000428997 581 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.7□□□□□ -1.82
LMX1BO60663 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.7□□□□□ -1.82
LMX1BO60663 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.7□□□□□ -1.82
LMX1BO60663 OR4C10P-201ENST00000434991 931 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 MTND2P20-201ENST00000440805 661 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.7□□□□□ -1.82
LMX1BO60663 SLC31A1P1-201ENST00000451221 567 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.7□□□□□ -1.82
LMX1BO60663 TRGVB-201ENST00000453257 471 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.7□□□□□ -1.82
LMX1BO60663 RPL21P71-201ENST00000465598 459 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 RN7SL604P-201ENST00000492589 296 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 RN7SL812P-201ENST00000493791 279 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AC005912.1-201ENST00000495392 255 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AC090071.1-201ENST00000507713 644 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 FABP5P5-201ENST00000515537 406 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.7□□□□□ -1.82
LMX1BO60663 MTCYBP41-201ENST00000528913 1123 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 SLC2A13P1-201ENST00000531560 322 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 DYNLL1P4-201ENST00000549314 266 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 CCNG2P1-201ENST00000549521 1000 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.7□□□□□ -1.82
LMX1BO60663 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.7□□□□□ -1.82
LMX1BO60663 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.7□□□□□ -1.82
LMX1BO60663 AC090515.3-201ENST00000560431 315 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.7□□□□□ -1.82
LMX1BO60663 MIR548AB-201ENST00000584917 84 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AC245389.1-201ENST00000605141 529 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AP002360.4-201ENST00000606980 481 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AC138749.5-201ENST00000611461 208 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.7□□□□□ -1.82
LMX1BO60663 AL445363.3-201ENST00000623080 671 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AC095031.1-201ENST00000623685 672 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AC026634.1-201ENST00000634369 198 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 HSPA8P17-201ENST00000427029 1382 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 AL079343.1-201ENST00000572358 1771 ntBASIC3.7□□□□□ -1.82
LMX1BO60663 DBF4P1-201ENST00000412976 1892 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms