Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC067959.1-201ENST00000604334 379 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AC128687.1-201ENST00000605304 619 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AC012360.2-201ENST00000609349 391 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AC015813.4-201ENST00000610469 179 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AL356266.1-201ENST00000623311 483 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AC084035.1-201ENST00000634543 607 ntBASIC4.1□□□□□ -1.75
LDB2O43679 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDB2O43679 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.1□□□□□ -1.75
LDB2O43679 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LDB2O43679 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LDB2O43679 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LDB2O43679 ZNF962P-201ENST00000443465 3140 ntBASIC4.1□□□□□ -1.75
LDB2O43679 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDB2O43679 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LDB2O43679 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
LDB2O43679 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LDB2O43679 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
LDB2O43679 AL079343.1-201ENST00000572358 1771 ntBASIC4.09□□□□□ -1.75
LDB2O43679 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LDB2O43679 AC074029.4-201ENST00000624796 1859 ntBASIC4.09□□□□□ -1.75
LDB2O43679 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LDB2O43679 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LDB2O43679 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LDB2O43679 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.09□□□□□ -1.75
LDB2O43679 RNA5SP515-201ENST00000364570 118 ntBASIC4.09□□□□□ -1.75
LDB2O43679 OR5H15-201ENST00000383696 930 ntBASIC4.09□□□□□ -1.75
LDB2O43679 RNU6-657P-201ENST00000383904 107 ntBASIC4.09□□□□□ -1.75
LDB2O43679 RNU6-192P-201ENST00000391253 100 ntBASIC4.09□□□□□ -1.75
LDB2O43679 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.09□□□□□ -1.75
LDB2O43679 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.09□□□□□ -1.75
LDB2O43679 MTCO2P34-201ENST00000421994 607 ntBASIC4.09□□□□□ -1.75
LDB2O43679 IPMKP1-201ENST00000425988 855 ntBASIC4.09□□□□□ -1.75
LDB2O43679 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.09□□□□□ -1.75
LDB2O43679 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.09□□□□□ -1.75
LDB2O43679 TRIM60P18-201ENST00000441518 828 ntBASIC4.09□□□□□ -1.75
LDB2O43679 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.09□□□□□ -1.75
LDB2O43679 TRGVB-201ENST00000453257 471 ntBASIC4.09□□□□□ -1.75
LDB2O43679 RPS7P7-201ENST00000463499 571 ntBASIC4.09□□□□□ -1.75
LDB2O43679 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.09□□□□□ -1.75
LDB2O43679 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.09□□□□□ -1.75
LDB2O43679 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LDB2O43679 MTCYBP17-201ENST00000503579 789 ntBASIC4.09□□□□□ -1.75
LDB2O43679 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LDB2O43679 AC004069.2-201ENST00000505438 1114 ntBASIC4.09□□□□□ -1.75
LDB2O43679 AC090071.1-201ENST00000507713 644 ntBASIC4.09□□□□□ -1.75
LDB2O43679 MTCYBP43-201ENST00000513621 740 ntBASIC4.09□□□□□ -1.75
LDB2O43679 RNA5SP216-201ENST00000516111 123 ntBASIC4.09□□□□□ -1.75
LDB2O43679 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.09□□□□□ -1.75
LDB2O43679 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.09□□□□□ -1.75
LDB2O43679 AC087276.1-201ENST00000529659 480 ntBASIC4.09□□□□□ -1.75
LDB2O43679 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.09□□□□□ -1.75
LDB2O43679 AL389895.1-201ENST00000554127 252 ntBASIC4.09□□□□□ -1.75
LDB2O43679 AC025884.1-201ENST00000556034 378 ntBASIC4.09□□□□□ -1.75
LDB2O43679 AC084757.1-201ENST00000559987 490 ntBASIC4.09□□□□□ -1.75
LDB2O43679 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.09□□□□□ -1.75
LDB2O43679 AGGF1P4-201ENST00000568249 801 ntBASIC4.09□□□□□ -1.75
LDB2O43679 MIR3611-201ENST00000584484 83 ntBASIC4.09□□□□□ -1.75
LDB2O43679 AC107982.3-201ENST00000584957 985 ntBASIC4.09□□□□□ -1.75
LDB2O43679 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.09□□□□□ -1.75
LDB2O43679 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.09□□□□□ -1.75
LDB2O43679 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LDB2O43679 AC068790.6-201ENST00000602558 258 ntBASIC4.09□□□□□ -1.75
LDB2O43679 AC104662.1-201ENST00000604448 511 ntBASIC4.09□□□□□ -1.75
LDB2O43679 RNU6-88P-201ENST00000606801 100 ntBASIC4.09□□□□□ -1.75
LDB2O43679 AC025594.3-201ENST00000613068 790 ntBASIC4.09□□□□□ -1.75
LDB2O43679 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LDB2O43679 AC092184.1-201ENST00000625042 715 ntBASIC4.09□□□□□ -1.75
LDB2O43679 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.09□□□□□ -1.75
LDB2O43679 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LDB2O43679 MTCO1P14-201ENST00000441695 1559 ntBASIC4.09□□□□□ -1.75
LDB2O43679 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.09□□□□□ -1.76
LDB2O43679 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LDB2O43679 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LDB2O43679 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LDB2O43679 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.09□□□□□ -1.76
LDB2O43679 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.09□□□□□ -1.76
LDB2O43679 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LDB2O43679 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.08□□□□□ -1.76
LDB2O43679 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 MAPK10-253ENST00000641010 4072 ntBASIC4.08□□□□□ -1.76
LDB2O43679 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LDB2O43679 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 OR10J6P-201ENST00000289731 930 ntBASIC4.08□□□□□ -1.76
LDB2O43679 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 RNU11-4P-201ENST00000391149 133 ntBASIC4.08□□□□□ -1.76
LDB2O43679 SNORA57.1-201ENST00000391227 145 ntBASIC4.08□□□□□ -1.76
LDB2O43679 DSTNP4-201ENST00000399472 474 ntBASIC4.08□□□□□ -1.76
LDB2O43679 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 SNORA11-201ENST00000408789 128 ntBASIC4.08□□□□□ -1.76
LDB2O43679 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.08□□□□□ -1.76
LDB2O43679 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 CYCSP46-201ENST00000423569 204 ntBASIC4.08□□□□□ -1.76
LDB2O43679 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.08□□□□□ -1.76
LDB2O43679 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.08□□□□□ -1.76
LDB2O43679 BMS1P19-201ENST00000433925 393 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AL356276.2-201ENST00000435919 558 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms