Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.52□□□□□ -1.69
PROM1O43490 FAM92A1P2-202ENST00000504766 877 ntBASIC4.52□□□□□ -1.69
PROM1O43490 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.52□□□□□ -1.69
PROM1O43490 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.52□□□□□ -1.69
PROM1O43490 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.52□□□□□ -1.69
PROM1O43490 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.52□□□□□ -1.69
PROM1O43490 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.52□□□□□ -1.69
PROM1O43490 CBX3P7-201ENST00000532876 502 ntBASIC4.52□□□□□ -1.69
PROM1O43490 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.52□□□□□ -1.69
PROM1O43490 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.52□□□□□ -1.69
PROM1O43490 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.52□□□□□ -1.69
PROM1O43490 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.52□□□□□ -1.69
PROM1O43490 FKBP1BP1-201ENST00000553366 325 ntBASIC4.52□□□□□ -1.69
PROM1O43490 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.52□□□□□ -1.69
PROM1O43490 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.52□□□□□ -1.69
PROM1O43490 MIR4270-201ENST00000581799 70 ntBASIC4.52□□□□□ -1.69
PROM1O43490 MIR4307-201ENST00000582802 84 ntBASIC4.52□□□□□ -1.69
PROM1O43490 AC009977.1-201ENST00000586015 570 ntBASIC4.52□□□□□ -1.69
PROM1O43490 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.52□□□□□ -1.69
PROM1O43490 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.52□□□□□ -1.69
PROM1O43490 HSPE1P14-201ENST00000605812 302 ntBASIC4.52□□□□□ -1.69
PROM1O43490 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.52□□□□□ -1.69
PROM1O43490 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.52□□□□□ -1.69
PROM1O43490 AC099654.14-201ENST00000638599 341 ntBASIC4.52□□□□□ -1.69
PROM1O43490 FAM157B-203ENST00000639350 358 ntBASIC4.52□□□□□ -1.69
PROM1O43490 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PROM1O43490 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
PROM1O43490 AC006971.1-201ENST00000407916 4486 ntBASIC4.52□□□□□ -1.69
PROM1O43490 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PROM1O43490 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PROM1O43490 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PROM1O43490 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PROM1O43490 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.52□□□□□ -1.69
PROM1O43490 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.51□□□□□ -1.69
PROM1O43490 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PROM1O43490 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PROM1O43490 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.51□□□□□ -1.69
PROM1O43490 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PROM1O43490 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PROM1O43490 RNY4P34-201ENST00000364779 95 ntBASIC4.51□□□□□ -1.69
PROM1O43490 Y_RNA.453-201ENST00000384223 109 ntBASIC4.51□□□□□ -1.69
PROM1O43490 ARL4AP5-201ENST00000404372 599 ntBASIC4.51□□□□□ -1.69
PROM1O43490 MIR1277-201ENST00000408536 78 ntBASIC4.51□□□□□ -1.69
PROM1O43490 RNA5SP146-201ENST00000410743 123 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.51□□□□□ -1.69
PROM1O43490 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 USP9YP6-201ENST00000413550 854 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.51□□□□□ -1.69
PROM1O43490 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.51□□□□□ -1.69
PROM1O43490 AL513174.1-201ENST00000423182 629 ntBASIC4.51□□□□□ -1.69
PROM1O43490 ZNF863P-201ENST00000426746 417 ntBASIC4.51□□□□□ -1.69
PROM1O43490 MTCO2P19-201ENST00000427513 598 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.51□□□□□ -1.69
PROM1O43490 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 BTF3P10-201ENST00000433415 495 ntBASIC4.51□□□□□ -1.69
PROM1O43490 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 YWHAZP8-201ENST00000436935 731 ntBASIC4.51□□□□□ -1.69
PROM1O43490 MTCO1P27-201ENST00000448269 226 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PROM1O43490 USP9YP34-201ENST00000453983 808 ntBASIC4.51□□□□□ -1.69
PROM1O43490 Z82190.1-201ENST00000454534 490 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AC099563.1-201ENST00000456086 418 ntBASIC4.51□□□□□ -1.69
PROM1O43490 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PROM1O43490 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PROM1O43490 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.51□□□□□ -1.69
PROM1O43490 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PROM1O43490 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PROM1O43490 KCTD9P2-201ENST00000512203 1013 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AC074344.1-201ENST00000512823 224 ntBASIC4.51□□□□□ -1.69
PROM1O43490 OR7H2P-201ENST00000513483 306 ntBASIC4.51□□□□□ -1.69
PROM1O43490 RNU1-6P-201ENST00000516290 144 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 OR4A12P-201ENST00000530847 918 ntBASIC4.51□□□□□ -1.69
PROM1O43490 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.51□□□□□ -1.69
PROM1O43490 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.51□□□□□ -1.69
PROM1O43490 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.51□□□□□ -1.69
PROM1O43490 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.51□□□□□ -1.69
PROM1O43490 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.51□□□□□ -1.69
PROM1O43490 AL389895.1-201ENST00000554127 252 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 SULT1C2P1-202ENST00000562418 459 ntBASIC4.51□□□□□ -1.69
PROM1O43490 EIF5A2P1-201ENST00000564027 460 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.51□□□□□ -1.69
PROM1O43490 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 AC209154.1-201ENST00000582156 337 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AP001180.3-201ENST00000582221 145 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.51□□□□□ -1.69
PROM1O43490 MAGOH2P-202ENST00000584384 429 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AC091135.1-201ENST00000585943 307 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.51□□□□□ -1.69
PROM1O43490 AP000907.4-201ENST00000604143 237 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AL031320.1-201ENST00000604177 357 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms