Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM38O00635 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM38O00635 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TRIM38O00635 AC073544.2-201ENST00000601155 540 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 AL606834.2-201ENST00000602954 668 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 AL355812.1-201ENST00000603215 216 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 AC103792.1-201ENST00000603591 919 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 RNA5SP108-201ENST00000605921 117 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 AC007390.2-201ENST00000606229 3803 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM38O00635 AC138749.5-201ENST00000611461 208 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 AC018816.2-201ENST00000621460 353 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM38O00635 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TRIM38O00635 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM38O00635 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM38O00635 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM38O00635 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM38O00635 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
TRIM38O00635 MTND4P23-201ENST00000447723 1363 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM38O00635 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM38O00635 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM38O00635 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM38O00635 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM38O00635 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TRIM38O00635 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM38O00635 RNU6-797P-201ENST00000363101 109 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 Y_RNA.126-201ENST00000363382 111 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 Y_RNA.248-201ENST00000364501 109 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TRIM38O00635 CYCSP45-201ENST00000402289 315 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 MTCO1P17-201ENST00000411522 491 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 RPS15AP38-201ENST00000413110 372 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 RPL7P57-201ENST00000423238 740 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 BMS1P19-201ENST00000433925 393 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 AL596276.1-201ENST00000434465 418 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.56□□□□□ -1.68
TRIM38O00635 AL356276.2-201ENST00000435919 558 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM38O00635 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM38O00635 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM38O00635 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM38O00635 ELOCP23-201ENST00000452014 332 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TRIM38O00635 AC022034.3-201ENST00000471393 478 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 AC108022.1-201ENST00000493466 478 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 RPL36AP41-201ENST00000493820 306 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.56□□□□□ -1.68
TRIM38O00635 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.56□□□□□ -1.68
TRIM38O00635 OR7K1P-201ENST00000546439 926 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM38O00635 SNORA59B-202ENST00000578183 701 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 MIR3939-201ENST00000582614 106 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM38O00635 AL020997.2-201ENST00000602607 184 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 AL133338.2-201ENST00000604292 736 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 AC115286.1-201ENST00000604298 434 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 RNU6-88P-201ENST00000606801 100 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM38O00635 AC126118.1-201ENST00000607744 628 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 MIR6716-201ENST00000613413 80 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 AC007742.2-201ENST00000618226 398 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM38O00635 U3.53-201ENST00000628922 216 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM38O00635 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM38O00635 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM38O00635 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
TRIM38O00635 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM38O00635 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM38O00635 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
TRIM38O00635 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM38O00635 AC074029.4-201ENST00000624796 1859 ntBASIC4.56□□□□□ -1.68
TRIM38O00635 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 AP002907.1-201ENST00000606361 1430 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 AC087359.1-201ENST00000508335 1740 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
TRIM38O00635 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 AC011477.1-204ENST00000623416 1325 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 RPL23AP57-201ENST00000332361 466 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM38O00635 RNU1-108P-201ENST00000362556 161 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 RNU6-462P-201ENST00000362659 105 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 SNORA71.2-201ENST00000364941 134 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 Y_RNA.303-201ENST00000364998 94 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM38O00635 MIR1193-201ENST00000408109 78 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 RPL23AP39-201ENST00000415533 405 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 NPM1P11-201ENST00000417106 855 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM38O00635 AL035410.1-201ENST00000427409 427 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 OR2B8P-201ENST00000432841 938 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 UBE2FP3-201ENST00000436366 524 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms