Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC007621.1-201ENST00000604544 437 ntBASIC2.65□□□□□ -1.99
CACNA1AO00555 Z82195.1-201ENST00000604558 398 ntBASIC2.65□□□□□ -1.99
CACNA1AO00555 AL359740.1-201ENST00000624340 592 ntBASIC2.65□□□□□ -1.99
CACNA1AO00555 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CACNA1AO00555 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.65□□□□□ -1.99
CACNA1AO00555 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CACNA1AO00555 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CACNA1AO00555 AC006989.1-201ENST00000427212 131 ntBASIC2.65□□□□□ -1.99
CACNA1AO00555 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC2.65□□□□□ -1.99
CACNA1AO00555 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.65□□□□□ -1.99
CACNA1AO00555 AC021205.2-201ENST00000480069 347 ntBASIC2.65□□□□□ -1.99
CACNA1AO00555 AC009101.1-201ENST00000568135 242 ntBASIC2.65□□□□□ -1.99
CACNA1AO00555 AC011494.1-201ENST00000596454 237 ntBASIC2.65□□□□□ -1.99
CACNA1AO00555 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC2.65□□□□□ -1.99
CACNA1AO00555 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC2.65□□□□□ -1.99
CACNA1AO00555 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CACNA1AO00555 AL450326.2-201ENST00000421913 1962 ntBASIC2.64□□□□□ -1.99
CACNA1AO00555 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CACNA1AO00555 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CACNA1AO00555 MIR137-201ENST00000385223 102 ntBASIC2.64□□□□□ -1.99
CACNA1AO00555 AP000275.1-201ENST00000411943 390 ntBASIC2.64□□□□□ -1.99
CACNA1AO00555 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.64□□□□□ -1.99
CACNA1AO00555 AL358075.3-201ENST00000426289 226 ntBASIC2.64□□□□□ -1.99
CACNA1AO00555 AL590639.1-201ENST00000456484 337 ntBASIC2.64□□□□□ -1.99
CACNA1AO00555 AC008716.1-201ENST00000511084 513 ntBASIC2.64□□□□□ -1.99
CACNA1AO00555 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CACNA1AO00555 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CACNA1AO00555 AC069528.2-201ENST00000624849 1991 ntBASIC2.64□□□□□ -1.99
CACNA1AO00555 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.64□□□□□ -1.99
CACNA1AO00555 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CACNA1AO00555 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CACNA1AO00555 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CACNA1AO00555 MIR518C-201ENST00000384822 101 ntBASIC2.64□□□□□ -1.99
CACNA1AO00555 U8.13-201ENST00000390842 128 ntBASIC2.64□□□□□ -1.99
CACNA1AO00555 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.64□□□□□ -1.99
CACNA1AO00555 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.64□□□□□ -1.99
CACNA1AO00555 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CACNA1AO00555 AC016542.2-201ENST00000624201 619 ntBASIC2.64□□□□□ -1.99
CACNA1AO00555 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CACNA1AO00555 AC099654.11-201ENST00000638857 294 ntBASIC2.64□□□□□ -1.99
CACNA1AO00555 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.64□□□□□ -1.99
CACNA1AO00555 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CACNA1AO00555 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
CACNA1AO00555 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CACNA1AO00555 LUZP4P1-201ENST00000415420 344 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 SPA17P1-201ENST00000416656 452 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.63□□□□□ -1.99
CACNA1AO00555 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.63□□□□□ -1.99
CACNA1AO00555 PRDX3P4-201ENST00000470828 747 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CACNA1AO00555 AC096725.1-201ENST00000514266 313 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC2.63□□□□□ -1.99
CACNA1AO00555 LSM3P2-201ENST00000551246 273 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 OR4H12P-201ENST00000556269 907 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.63□□□□□ -1.99
CACNA1AO00555 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CACNA1AO00555 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.63□□□□□ -1.99
CACNA1AO00555 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CACNA1AO00555 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.63□□□□□ -1.99
CACNA1AO00555 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CACNA1AO00555 SNORD114-30-201ENST00000364448 72 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 SNORA70.7-201ENST00000384159 133 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CACNA1AO00555 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.63□□□□□ -1.99
CACNA1AO00555 CST9LP2-201ENST00000437612 320 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 AC092155.2-201ENST00000454675 477 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 RNA5SP103-201ENST00000459503 118 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC2.63□□□□□ -1.99
CACNA1AO00555 AC107222.1-201ENST00000510899 637 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 RNA5SP395-201ENST00000516567 118 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.63□□□□□ -1.99
CACNA1AO00555 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.63□□□□□ -1.99
CACNA1AO00555 AC110994.2-201ENST00000635481 492 ntBASIC2.63□□□□□ -1.99
CACNA1AO00555 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.63□□□□□ -1.99
CACNA1AO00555 AC004925.1-201ENST00000624256 2706 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 GABRG2-229ENST00000641017 3628 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CACNA1AO00555 GSTA9P-201ENST00000406231 611 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 BTF3P4-201ENST00000418852 495 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 CYCSP49-201ENST00000420810 319 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC2.62□□□□□ -1.99
CACNA1AO00555 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.62□□□□□ -1.99
CACNA1AO00555 RNU1-143P-201ENST00000516296 146 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 AP001804.3-201ENST00000525146 880 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.62□□□□□ -1.99
CACNA1AO00555 U1.23-201ENST00000610293 146 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 RNU1-68P-201ENST00000615382 146 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 U1.39-201ENST00000621562 146 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.62□□□□□ -1.99
CACNA1AO00555 AC073476.4-201ENST00000628409 72 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CACNA1AO00555 AC000367.1-201ENST00000452711 1766 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.62□□□□□ -1.99
CACNA1AO00555 RNU1-108P-201ENST00000362556 161 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 RNU1-73P-201ENST00000383971 164 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CACNA1AO00555 AC096638.1-201ENST00000444678 216 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms