Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SHISA3A0PJX4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHISA3A0PJX4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHISA3A0PJX4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHISA3A0PJX4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
SHISA3A0PJX4 ZNF734P-201ENST00000419494 1534 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AL078621.3-201ENST00000623707 2042 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC116667.1-201ENST00000604855 2072 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 MTND5P19-201ENST00000424872 1794 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC092681.1-201ENST00000297369 291 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RNU6-1287P-201ENST00000362914 107 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RNVU1-3-201ENST00000364313 161 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 SNORA24.1-201ENST00000384401 135 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RNU6-1060P-201ENST00000384664 107 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RNU6-331P-201ENST00000384724 107 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RNU6-308P-201ENST00000390957 107 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RNA5SP241-201ENST00000391326 114 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RNA5SP198-201ENST00000410376 127 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RNF10P1-201ENST00000418589 369 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 ATG3P1-201ENST00000419507 911 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RPL7P46-201ENST00000425129 740 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 CALM2P2-201ENST00000428512 440 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 LINC00328-2P-201ENST00000436585 219 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 TIMM8BP2-201ENST00000445940 251 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC020550.1-201ENST00000447385 163 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 MTND1P17-201ENST00000448961 204 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RPL10P17-201ENST00000453852 316 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 PPIAP7-201ENST00000454070 489 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC005008.1-201ENST00000456151 612 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RPS27AP1-201ENST00000475545 471 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RPS27P27-201ENST00000498779 255 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RNU6-1092P-201ENST00000516955 87 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 IGLV3-24-201ENST00000517477 197 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AP000620.1-201ENST00000527147 504 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 OR5D15P-201ENST00000531671 942 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 MIR3672-201ENST00000584290 82 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC108738.1-201ENST00000603703 237 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC104662.1-201ENST00000604448 511 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC087588.2-201ENST00000617667 426 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AL136313.1-201ENST00000624804 202 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 IQCB2P-201ENST00000401788 1633 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 PHKBP1-201ENST00000450951 1951 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 AC100757.1-201ENST00000616872 1835 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 OR55B1P-203ENST00000641518 2602 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SHISA3A0PJX4 THAP12P5-201ENST00000405864 2275 ntBASIC4.92□□□□□ -1.62
SHISA3A0PJX4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 BRAFP1-201ENST00000445336 2703 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RNU6-1252P-201ENST00000363054 104 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RNU6-593P-201ENST00000364716 112 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RN7SKP292-201ENST00000365522 317 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RN7SKP187-201ENST00000365536 330 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RNU6-432P-201ENST00000384196 109 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 Y_RNA.452-201ENST00000384202 108 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 Y_RNA.576-201ENST00000384781 102 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 MIR621-201ENST00000384919 96 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 PPIAP9-201ENST00000403866 498 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RNA5SP107-201ENST00000411358 122 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RNU6-1304P-201ENST00000411374 106 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RNU6-516P-201ENST00000411381 104 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 SKA2P1-201ENST00000425592 390 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms