Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CSNK1G3Q9Y6M4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CSNK1G3Q9Y6M4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSNK1G3Q9Y6M4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSNK1G3Q9Y6M4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.71□□□□□ -1.82
CSNK1G3Q9Y6M4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 RNU6-839P-201ENST00000363347 108 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 RNA5SP387-201ENST00000364226 106 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 RNU6-83P-201ENST00000384568 112 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 RNU6-1151P-201ENST00000384684 107 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 MIR34B-201ENST00000385076 84 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 ATP5F1P4-201ENST00000397288 746 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AL008987.1-201ENST00000415528 237 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 Z93242.1-201ENST00000427102 353 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC087650.1-201ENST00000431445 468 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 CETN4P-201ENST00000432407 469 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 HMGN2P31-201ENST00000432430 273 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 ATP5HP2-201ENST00000433885 485 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 KCTD9P3-201ENST00000434597 1169 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC007327.1-201ENST00000447461 264 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 RPS3AP46-201ENST00000448352 682 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 SNORD105B-201ENST00000458770 79 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC096992.1-201ENST00000459808 709 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC069499.1-201ENST00000489433 509 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC048346.1-201ENST00000510247 144 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 PDCL2P2-201ENST00000533651 189 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 GTF2IP22-201ENST00000554443 182 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC008687.2-201ENST00000597865 520 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC231759.1-201ENST00000616455 597 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 BDP1P-201ENST00000582658 1990 ntBASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSNK1G3Q9Y6M4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AL049781.1-201ENST00000623195 3585 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 HMGB1P5-201ENST00000255320 642 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AC016716.1-201ENST00000265882 708 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 SNORD3H-201ENST00000384486 214 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 PRELID3BP11-201ENST00000414230 479 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AC007435.1-201ENST00000421086 415 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AC010099.3-201ENST00000423896 409 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 RPL30P3-201ENST00000424262 333 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 RPL7P44-201ENST00000424827 742 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 RPL23AP76-201ENST00000441860 458 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 UBDP1-202ENST00000457888 382 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AC126121.1-201ENST00000482313 553 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 RPL7P24-201ENST00000493052 752 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AC104619.4-201ENST00000510773 249 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AC008837.2-201ENST00000513076 418 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 RNU6-885P-201ENST00000516607 104 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 RNA5SP135-201ENST00000517019 125 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AC022790.1-201ENST00000522872 204 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 MTATP6P15-201ENST00000527233 835 ntBASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.69□□□□□ -1.82
CSNK1G3Q9Y6M4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms