Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MTCO2P16-201ENST00000436962 677 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC091862.1-201ENST00000438016 1100 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AL121871.1-201ENST00000443413 436 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AL162591.2-201ENST00000449634 317 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC098824.1-201ENST00000453565 980 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 RN7SL481P-201ENST00000477764 299 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 RN7SL346P-201ENST00000491561 294 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC093278.1-201ENST00000494700 600 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 CEACAMP10-202ENST00000495431 496 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC108064.1-201ENST00000513791 460 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 RNU6-1095P-201ENST00000516148 108 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AP001781.1-201ENST00000530977 207 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC126177.3-201ENST00000551839 688 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 MIR4715-201ENST00000584117 79 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC010928.3-201ENST00000587712 541 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC006254.3-201ENST00000603353 884 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 TUG1_1.1-201ENST00000610654 145 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC002550.2-201ENST00000621246 394 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC104260.2-201ENST00000623551 3497 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AC139713.2-215ENST00000641428 5037 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC108467.2-201ENST00000617640 1597 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 OR14L1P-202ENST00000641545 3009 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 SNORD96B-201ENST00000386148 79 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 MIR921-201ENST00000401133 56 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 RNU2-47P-201ENST00000410649 186 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AL359704.1-201ENST00000411586 781 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 UQCRBP1-201ENST00000421129 336 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC009480.2-201ENST00000422916 432 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 RPEP3-201ENST00000425462 676 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC239367.2-201ENST00000447309 705 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 ISCUP1-201ENST00000454451 448 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 SNORD121B-201ENST00000458838 81 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 RNA5SP269-201ENST00000459032 137 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 SCARNA10-201ENST00000459255 330 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC068724.1-201ENST00000487100 792 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC078817.1-201ENST00000492623 435 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC112204.1-201ENST00000502591 103 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 PRELID3BP7-201ENST00000503606 469 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC060788.1-201ENST00000521318 469 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC018630.1-201ENST00000541376 925 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 MTCYBP33-201ENST00000575007 1130 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AP005136.1-201ENST00000579765 429 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC069061.3-201ENST00000582254 823 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 ELOCP28-201ENST00000590044 317 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 RPL12P25-202ENST00000598100 674 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC012065.4-201ENST00000602445 679 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC00901.1-201ENST00000617252 152 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AC108751.5-201ENST00000492880 1336 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AP002001.2-201ENST00000529025 1469 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 AL133412.1-201ENST00000380194 2992 ntBASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A3BPQ9Y5P4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC004925.1-201ENST00000624256 2706 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC125257.1-201ENST00000560400 2930 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 PNPT1P2-201ENST00000456768 2050 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 RNU5E-5P-201ENST00000365379 116 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms