Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AL606534.2-204ENST00000635008 178 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AOX3P-204ENST00000491025 2107 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC074029.4-201ENST00000624796 1859 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
LIMD1Q9UGP4 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.46□□□□□ -1.37
LIMD1Q9UGP4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
LIMD1Q9UGP4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.46□□□□□ -1.37
LIMD1Q9UGP4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.46□□□□□ -1.37
LIMD1Q9UGP4 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.46□□□□□ -1.37
LIMD1Q9UGP4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.46□□□□□ -1.37
LIMD1Q9UGP4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
LIMD1Q9UGP4 AC123769.1-201ENST00000530992 3192 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 RHOT1P2-201ENST00000366423 333 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 RNU6-26P-201ENST00000383985 107 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 Y_RNA.473-201ENST00000384333 102 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 MIR143-201ENST00000385300 106 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 RNU6-55P-201ENST00000411092 107 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 HMGB3P24-201ENST00000433260 622 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AL451136.1-201ENST00000435399 325 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 SUMO1P2-201ENST00000452524 304 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AC007967.1-201ENST00000455422 1159 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 RNA5SP362-201ENST00000516048 118 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 IGLV2-28-201ENST00000520681 304 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AC091516.1-201ENST00000549191 703 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AC022404.1-201ENST00000555320 273 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 MIR1273E-201ENST00000581165 102 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AC104118.1-201ENST00000607625 1589 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AC211433.2-201ENST00000608433 387 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 MIR6798-201ENST00000612887 67 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 MIR6130-201ENST00000619419 109 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AP002370.1-201ENST00000528055 1602 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 AC010329.1-201ENST00000593903 8328 ntBASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
LIMD1Q9UGP4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 RNU6-1026P-201ENST00000384465 108 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 RNU6-713P-201ENST00000384761 107 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 FTLP19-201ENST00000433300 394 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 OSTCP8-201ENST00000445117 448 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC008264.1-201ENST00000447612 367 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC112492.4-201ENST00000456549 352 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC008571.1-201ENST00000467232 300 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 RPL31P60-201ENST00000478450 367 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC022215.1-201ENST00000481770 362 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 RPL7P23-201ENST00000493874 747 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 SCARNA18.1-201ENST00000516330 83 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 Y_RNA.710-201ENST00000516975 110 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC007991.1-201ENST00000522680 631 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 GSTP1P1-201ENST00000548078 319 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC016727.2-201ENST00000603988 621 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AL359704.2-201ENST00000604335 521 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC104687.2-201ENST00000604442 342 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 Z98751.3-201ENST00000604447 521 ntBASIC6.45□□□□□ -1.38
LIMD1Q9UGP4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms