Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 AC116158.1-201ENST00000560231 2129 ntBASIC3.46□□□□□ -1.85
PHRF1Q9P1Y6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.46□□□□□ -1.85
PHRF1Q9P1Y6 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 AC022031.1-201ENST00000585985 2593 ntBASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 MTND5P19-201ENST00000424872 1794 ntBASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 AL590290.1-201ENST00000405336 380 ntBASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 MTCO3P31-201ENST00000405526 789 ntBASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 OR51A3P-201ENST00000413596 924 ntBASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 RPLP0P7-201ENST00000416050 667 ntBASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 AL662791.1-201ENST00000441992 928 ntBASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 AC021146.5-201ENST00000503544 545 ntBASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 AC108210.2-201ENST00000503681 201 ntBASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 SEC11B-201ENST00000518383 499 ntBASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 AC022069.1-201ENST00000582910 658 ntBASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.46□□□□□ -1.86
PHRF1Q9P1Y6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 MIR181A2-201ENST00000384863 110 ntBASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 RNU6-482P-201ENST00000391068 107 ntBASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 HSPD1P16-201ENST00000402302 394 ntBASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 AL356320.1-201ENST00000429616 163 ntBASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 HMGB1P25-201ENST00000468402 607 ntBASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 AC234781.5-201ENST00000508429 271 ntBASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 Z99129.2-201ENST00000619967 314 ntBASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 AC138915.3-201ENST00000562908 1389 ntBASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 MAPK10-322ENST00000641485 4530 ntBASIC3.45□□□□□ -1.86
PHRF1Q9P1Y6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 AC080125.1-201ENST00000414888 684 ntBASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 RPS15AP6-201ENST00000420703 385 ntBASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 AL590399.6-201ENST00000446396 307 ntBASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 AL389895.1-201ENST00000554127 252 ntBASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 MIR4648-201ENST00000580107 72 ntBASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 AC083760.1-201ENST00000589621 670 ntBASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 AL359511.1-201ENST00000402970 211 ntBASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 RPS6P12-201ENST00000432491 726 ntBASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 SNORA35B-201ENST00000607417 129 ntBASIC3.44□□□□□ -1.86
PHRF1Q9P1Y6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 MIR27B-201ENST00000385129 97 ntBASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 CYCSP45-201ENST00000402289 315 ntBASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 AL031736.2-201ENST00000426573 787 ntBASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 AC008565.1-201ENST00000509046 885 ntBASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 USP9YP5-201ENST00000511770 630 ntBASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 CRYM-AS1-204ENST00000637983 556 ntBASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHRF1Q9P1Y6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 RNA5SP99-201ENST00000364020 114 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 SNORD114-30-201ENST00000364448 72 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 SNORA68.2-201ENST00000391263 128 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 RNU4-53P-201ENST00000410828 140 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 AL135786.1-201ENST00000415892 214 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 RN7SL636P-201ENST00000497504 294 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 KCTD9P5-201ENST00000504141 1170 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 SUMO2P4-201ENST00000504193 276 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 AC034244.2-201ENST00000514668 858 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 AC128657.1-201ENST00000549459 145 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 MIR3186-201ENST00000577404 85 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 HSPA8P4-201ENST00000511877 1920 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms