Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU1-101P-201ENST00000391171 127 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 SAR1AP2-201ENST00000392696 594 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AL356057.1-202ENST00000402263 756 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 RNA5SP129-201ENST00000410276 118 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 MTCYBP24-201ENST00000420387 1106 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 CR848007.2-201ENST00000424918 787 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 BTF3P5-201ENST00000457252 467 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 snoU13.7-201ENST00000459220 104 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AC109925.1-201ENST00000478069 331 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 WBP1LP4-201ENST00000505043 344 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 C1DP5-201ENST00000525775 383 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 OR4H12P-201ENST00000556269 907 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AC005951.1-201ENST00000576706 485 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AL109653.1-201ENST00000603091 248 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 IGHV3-29-201ENST00000604817 344 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AC011374.2-201ENST00000607135 526 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 AC002546.1-201ENST00000588041 2504 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 RNU6-883P-201ENST00000384597 107 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 RPL21P3-201ENST00000395517 478 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 TAF9BP1-201ENST00000396646 746 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AL353692.2-201ENST00000407054 335 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 RNU4-47P-201ENST00000410876 114 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 ARL4AP4-201ENST00000434170 518 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 ELOCP13-201ENST00000443934 329 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 NECAP1P2-201ENST00000455668 727 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 RPS15AP1-201ENST00000457423 391 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AC146507.2-201ENST00000460608 476 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 CABYRP1-201ENST00000465493 1045 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 RPL7P5-201ENST00000471472 736 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 HIGD1AP3-201ENST00000515857 278 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AC093014.1-201ENST00000548926 724 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AL442163.2-201ENST00000553912 710 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AL133393.1-201ENST00000603277 287 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 ELOCP35-201ENST00000604289 336 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AL390240.1-201ENST00000612950 384 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AC105227.2-201ENST00000615075 605 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 OR8B1P-202ENST00000641132 1178 ntBASIC3.12□□□□□ -1.91
TREX1Q9NSU2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TREX1Q9NSU2 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AL021368.2-201ENST00000606125 5352 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 RNU6-50P-201ENST00000362356 103 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 RNA5SP267-201ENST00000364893 126 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC110754.1-201ENST00000399740 601 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AL121972.1-201ENST00000402023 252 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 ARL2BPP3-201ENST00000421226 480 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 PTP4A1P3-201ENST00000433661 420 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 FTH1P1-201ENST00000437933 532 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 HSPE1P28-201ENST00000443139 211 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 Z77249.1-201ENST00000444622 1175 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 RPL7P59-201ENST00000447700 943 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 MTND5P8-201ENST00000449817 1083 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 RPL23AP23-201ENST00000452590 471 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC104308.1-201ENST00000454621 333 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC091179.1-201ENST00000461606 579 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 RN7SL863P-201ENST00000462370 296 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms