Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC021382.1-201ENST00000483523 359 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 AC112484.3-201ENST00000505910 329 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 RNU6-1038P-201ENST00000516516 104 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 NCAPGP2-201ENST00000557911 754 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 AP005403.1-201ENST00000579720 229 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 AC091925.1-201ENST00000623204 462 ntBASIC5.37□□□□□ -1.55
SSU72Q9NP77 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSU72Q9NP77 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSU72Q9NP77 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSU72Q9NP77 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
SSU72Q9NP77 AL731566.1-201ENST00000620490 1937 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSU72Q9NP77 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSU72Q9NP77 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSU72Q9NP77 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 RNU6-97P-201ENST00000363387 104 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 Y_RNA.378-201ENST00000365652 113 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 MIR92A2-201ENST00000385299 75 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 MTCYBP4-201ENST00000401524 249 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 AL606923.1-201ENST00000406616 190 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 RN7SKP16-201ENST00000410180 299 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 RN7SKP158-201ENST00000410453 326 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 OR6D1P-201ENST00000436165 939 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 MTND1P9-201ENST00000453775 944 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 AC087879.1-201ENST00000474343 374 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 CCDC34P1-201ENST00000507441 517 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 FTH1P21-201ENST00000512179 511 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSU72Q9NP77 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSU72Q9NP77 AC109635.4-202ENST00000531666 412 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 HMGN1P26-201ENST00000558737 303 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 RPL21P12-201ENST00000559810 515 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 RPL12P48-201ENST00000605620 304 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSU72Q9NP77 RN7SL544P-201ENST00000617232 284 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 RN7SL763P-201ENST00000620922 284 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 MTND4P1-201ENST00000457501 1466 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 AC023421.1-201ENST00000590535 1785 ntBASIC5.36□□□□□ -1.55
SSU72Q9NP77 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.36□□□□□ -1.55
SSU72Q9NP77 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSU72Q9NP77 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC008079.2-201ENST00000623543 20396 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 TAB3P1-202ENST00000452645 1634 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSU72Q9NP77 MTCO1P7-201ENST00000419523 1542 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 RNU6-511P-201ENST00000363496 107 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 RNU5A-8P-201ENST00000364102 114 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC005522.1-201ENST00000395416 346 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 RPS3AP2-201ENST00000407190 754 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 RN7SKP247-201ENST00000411094 308 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC079807.1-201ENST00000429993 481 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 HMGB3P24-201ENST00000433260 622 ntBASIC5.35□□□□□ -1.55
SSU72Q9NP77 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.35□□□□□ -1.55
SSU72Q9NP77 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms