Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 RPL23AP57-201ENST00000332361 466 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 MIR422A-201ENST00000362286 90 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 SNORA31-201ENST00000362607 130 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 RNU6-98P-201ENST00000384173 107 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 ATP5F1P6-201ENST00000402768 767 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 USP9YP31-201ENST00000431405 881 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC015908.1-201ENST00000478739 476 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC078918.1-201ENST00000498515 228 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 MTCO2P9-201ENST00000503214 694 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC110792.2-201ENST00000510278 224 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 GMPSP1-201ENST00000514075 579 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 CIR1P1-201ENST00000524055 1133 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AL121603.1-201ENST00000553815 142 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC093510.2-201ENST00000562820 896 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC090751.1-201ENST00000566966 267 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC006539.2-201ENST00000601729 572 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 PRELID3BP8-201ENST00000604148 295 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AL365503.1-201ENST00000605247 905 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC018754.1-201ENST00000607486 925 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC120053.1-201ENST00000607706 736 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 ATP5A1P2-202ENST00000616464 443 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC121761.2-201ENST00000617300 689 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 AC048347.1-201ENST00000624621 427 ntBASIC3.44□□□□□ -1.86
NXF3Q9H4D5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
NXF3Q9H4D5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 RNA5SP189-201ENST00000364920 115 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AP002088.1-201ENST00000382740 395 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 RNU6-356P-201ENST00000384140 107 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 SNORA54-201ENST00000384281 123 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 MIR142-201ENST00000384835 87 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 RNU4-27P-201ENST00000410889 139 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 RNU6-55P-201ENST00000411092 107 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 RNU6-954P-201ENST00000411355 107 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 RNU2-6P-201ENST00000411404 190 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 UBE2V1P11-201ENST00000411559 285 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 VTA1P1-201ENST00000414044 866 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AL606495.1-201ENST00000422100 813 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AL512661.1-201ENST00000434586 1253 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 HMGB3P11-201ENST00000440127 604 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 RPS27P5-201ENST00000444247 244 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 ELOCP23-201ENST00000452014 332 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 S100A11P2-201ENST00000467589 312 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AL049830.2-201ENST00000480072 201 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC005351.1-201ENST00000511152 786 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC008885.1-201ENST00000514930 301 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 RN7SKP234-201ENST00000517173 224 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC022079.2-201ENST00000619739 566 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AC092628.2-201ENST00000622492 339 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 AF117829.1-206ENST00000621883 3802 ntBASIC3.43□□□□□ -1.86
NXF3Q9H4D5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NXF3Q9H4D5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
NXF3Q9H4D5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NXF3Q9H4D5 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NXF3Q9H4D5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NXF3Q9H4D5 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms