Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 AC108078.3-201ENST00000502633 489 ntBASIC3.63□□□□□ -1.83
UBQLN3Q9H347 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 MIR4760-201ENST00000585040 80 ntBASIC3.63□□□□□ -1.83
UBQLN3Q9H347 CCDC58P3-201ENST00000590792 430 ntBASIC3.63□□□□□ -1.83
UBQLN3Q9H347 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 AL592436.1-201ENST00000605135 558 ntBASIC3.63□□□□□ -1.83
UBQLN3Q9H347 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 AC073968.1-201ENST00000618594 637 ntBASIC3.63□□□□□ -1.83
UBQLN3Q9H347 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.63□□□□□ -1.83
UBQLN3Q9H347 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
UBQLN3Q9H347 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 RNU6-216P-201ENST00000363282 104 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 MTND4LP20-201ENST00000402379 270 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 RNA5SP56-201ENST00000410277 118 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 PTP4A1P5-201ENST00000420305 455 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 ATP5F1P1-201ENST00000433775 569 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC092427.1-201ENST00000439177 601 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 MTCO2P25-201ENST00000447065 681 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 USP9YP25-201ENST00000457708 443 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 snoU13.3-201ENST00000459441 104 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC020699.1-201ENST00000505161 445 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 BTF3L4P4-201ENST00000506381 449 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 RNA5SP143-201ENST00000516936 115 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 NDUFA5P2-201ENST00000519723 344 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC009101.1-201ENST00000568135 242 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 LARP7P2-201ENST00000575306 125 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 MIR4644-201ENST00000579929 84 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AL391001.1-201ENST00000602747 715 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AL606490.9-201ENST00000603331 271 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 DUXAP3-201ENST00000603616 594 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC124312.4-201ENST00000605533 310 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AL451074.6-201ENST00000608512 729 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC107075.1-201ENST00000613695 314 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AL591424.2-201ENST00000617023 128 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AC120349.2-201ENST00000625002 298 ntBASIC3.62□□□□□ -1.83
UBQLN3Q9H347 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBQLN3Q9H347 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AL133383.2-201ENST00000622958 2336 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 RNA5SP399-201ENST00000364003 117 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 RNU6-1181P-201ENST00000384191 106 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 MIR506-201ENST00000384998 124 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 ARF4P3-201ENST00000397387 509 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 HSPE1P26-201ENST00000405341 275 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AL450338.1-201ENST00000407987 512 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AL050321.1-201ENST00000432363 400 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AC084290.1-201ENST00000434995 374 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 HMGB1P37-201ENST00000439613 609 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 EXTL2P1-201ENST00000446218 416 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 RPL12P26-201ENST00000452430 487 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 HMGN2P7-201ENST00000456186 273 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 RPS4XP15-201ENST00000489210 795 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms