Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 PABPC1P3-201ENST00000469174 459 ntBASIC3.66□□□□□ -1.82
DDX47Q9H0S4 RPS4XP22-201ENST00000480755 780 ntBASIC3.66□□□□□ -1.82
DDX47Q9H0S4 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX47Q9H0S4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.66□□□□□ -1.82
DDX47Q9H0S4 AC093853.1-201ENST00000515689 483 ntBASIC3.66□□□□□ -1.82
DDX47Q9H0S4 RN7SKP244-201ENST00000516513 307 ntBASIC3.66□□□□□ -1.82
DDX47Q9H0S4 AP003102.1-201ENST00000525638 661 ntBASIC3.66□□□□□ -1.82
DDX47Q9H0S4 NDUFS5P6-201ENST00000529136 295 ntBASIC3.66□□□□□ -1.82
DDX47Q9H0S4 AP001317.1-201ENST00000531194 960 ntBASIC3.66□□□□□ -1.82
DDX47Q9H0S4 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.66□□□□□ -1.82
DDX47Q9H0S4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.66□□□□□ -1.82
DDX47Q9H0S4 SULT1C2P1-202ENST00000562418 459 ntBASIC3.66□□□□□ -1.82
DDX47Q9H0S4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX47Q9H0S4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.66□□□□□ -1.82
DDX47Q9H0S4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.66□□□□□ -1.82
DDX47Q9H0S4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX47Q9H0S4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.66□□□□□ -1.82
DDX47Q9H0S4 AP004289.2-201ENST00000444413 1457 ntBASIC3.66□□□□□ -1.82
DDX47Q9H0S4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX47Q9H0S4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
DDX47Q9H0S4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX47Q9H0S4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX47Q9H0S4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
DDX47Q9H0S4 AL513302.2-201ENST00000562313 1842 ntBASIC3.65□□□□□ -1.82
DDX47Q9H0S4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
DDX47Q9H0S4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 PPIAP31-201ENST00000405422 495 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 RNA5SP31-201ENST00000411144 127 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 KRR1P1-201ENST00000419430 803 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 C1DP1-201ENST00000426049 402 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC006548.1-201ENST00000427470 102 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AP000907.1-201ENST00000428428 510 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 NPM1P13-201ENST00000452663 865 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 RN7SL442P-201ENST00000473804 320 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 TMED11P-201ENST00000479478 690 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC021205.2-201ENST00000480069 347 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 TRAV31-201ENST00000502780 342 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 HMGB1P22-201ENST00000505315 124 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC010460.1-201ENST00000507087 466 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC112206.4-201ENST00000515142 405 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 OR8R1P-201ENST00000543943 764 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 DNAJC19P3-201ENST00000594491 331 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 BNIP3P31-201ENST00000604515 566 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AL592148.2-201ENST00000612210 372 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC073968.1-201ENST00000618594 637 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AL354798.1-201ENST00000622505 329 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC112200.1-201ENST00000625015 234 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 CR381572.1-201ENST00000625098 102 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC026634.1-201ENST00000634369 198 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC087821.2-201ENST00000637086 450 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 AC106858.1-201ENST00000637497 429 ntBASIC3.65□□□□□ -1.83
DDX47Q9H0S4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX47Q9H0S4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 RNU1-75P-201ENST00000347264 129 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 RNU6-707P-201ENST00000364647 95 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 EI24P2-201ENST00000397776 1076 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 RNU6-628P-201ENST00000410675 107 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 RAC1P8-201ENST00000427086 527 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AC127537.2-201ENST00000439258 465 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AC010301.1-201ENST00000473936 355 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AL139099.1-201ENST00000497398 403 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 SUMO2P5-201ENST00000506790 245 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 SNORA70.19-201ENST00000516717 90 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 SNORA48.10-201ENST00000516965 160 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 RNU6-1028P-201ENST00000517164 93 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 MIR3690-201ENST00000580266 75 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AC107982.3-201ENST00000584957 985 ntBASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX47Q9H0S4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms