Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC009229.4-201ENST00000623854 1947 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 IRF5P1-201ENST00000504852 2164 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 SMG1P6-201ENST00000532337 2930 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 Y_RNA.9-201ENST00000362354 101 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 RNU5E-4P-201ENST00000364931 120 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 MIR921-201ENST00000401133 56 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 Z97832.1-201ENST00000402490 328 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 RPS16P5-201ENST00000406501 404 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 GJA6P-201ENST00000415117 1042 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 MTCO2P5-201ENST00000422621 426 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 RPL7P57-201ENST00000423238 740 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 Z74021.1-201ENST00000423610 407 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 RPS17P8-201ENST00000434525 335 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 RSU1P2-202ENST00000437884 485 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 RPL22P17-201ENST00000438729 315 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 HSPE1P28-201ENST00000443139 211 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AC002381.1-201ENST00000447049 280 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 VN1R34P-201ENST00000447387 883 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AC104651.2-201ENST00000447549 528 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 WASF1P1-201ENST00000447560 1131 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 Z99127.3-201ENST00000448158 395 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AC239809.1-201ENST00000450470 217 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 RPL23AP56-201ENST00000460778 453 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 RN7SL319P-201ENST00000480656 221 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AC108078.1-201ENST00000508073 725 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 PTGES3P3-201ENST00000511479 482 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AC104057.1-201ENST00000515547 497 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AL391840.1-201ENST00000571144 367 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 BBIP1P1-201ENST00000602999 279 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 MEMO1P5-201ENST00000604810 406 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AL445264.1-201ENST00000621719 171 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AC091905.4-201ENST00000623432 202 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AC068880.5-201ENST00000624331 290 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 MIR6863-201ENST00000636112 90 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 INTS6P1-201ENST00000504674 2530 ntBASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
AMBRA1Q9C0C7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 CCT4P2-201ENST00000233836 1548 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 RNY4P34-201ENST00000364779 95 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 RNU6-1226P-201ENST00000384317 107 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 RNU6-178P-201ENST00000384631 104 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 RPS3AP36-201ENST00000398190 775 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AL590002.1-201ENST00000406554 418 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 FCF1P10-201ENST00000407590 479 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 SPA17P1-201ENST00000416656 452 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 DPPA2P1-201ENST00000428060 556 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 TIMM9P3-201ENST00000428659 274 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 DNAJC19P7-201ENST00000428811 344 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 RPL7L1P1-201ENST00000448259 785 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AP000542.1-201ENST00000448473 371 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 snoU13.20-201ENST00000459180 104 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 PABPC1P3-201ENST00000469174 459 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AC104563.1-201ENST00000476147 376 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 MTND1P3-201ENST00000484956 952 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 KCTD9P5-201ENST00000504141 1170 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms