Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC092447.10-201ENST00000620607 1652 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 MFSD8-242ENST00000641690 4199 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 Y_RNA.3-201ENST00000362331 103 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 SNORA70E-201ENST00000384492 135 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 MIR298-201ENST00000401212 88 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AL109941.1-201ENST00000401925 229 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AL356421.1-201ENST00000403255 413 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 RNU2-66P-201ENST00000410650 161 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 RSU1P3-201ENST00000412878 835 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 OR5BE1P-201ENST00000425977 939 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 MTCO3P30-201ENST00000426425 670 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 NANOGP6-201ENST00000429190 847 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC005154.2-201ENST00000438110 379 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 TPT1P13-201ENST00000449760 499 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 RPS20P24-201ENST00000457473 361 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AP001992.1-205ENST00000462248 379 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 RPS3AP41-201ENST00000462701 778 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 RPL5P30-201ENST00000465511 891 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC011825.1-201ENST00000484967 388 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 OR5M7P-201ENST00000526140 972 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AL110118.1-201ENST00000553543 400 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC010546.1-201ENST00000569391 485 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 EIF1P4-201ENST00000572664 335 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC137800.2-201ENST00000574375 120 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 MIR4528-201ENST00000577763 90 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC091042.1-201ENST00000579213 173 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 MIR4737-201ENST00000583979 81 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC091178.1-203ENST00000584586 279 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 SLC25A36P1-201ENST00000590111 465 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 MIR6853-201ENST00000619642 74 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 MIR6730-201ENST00000622213 67 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 OR5BE1P-202ENST00000641168 1176 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 ZNF137P-201ENST00000456718 1920 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC027514.1-201ENST00000588561 1603 ntBASIC4.54□□□□□ -1.68
TRIM54Q9BYV2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 OR14L1P-202ENST00000641545 3009 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC136624.1-201ENST00000400791 413 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC007742.1-201ENST00000425789 329 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC104837.2-201ENST00000427236 424 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 RPL23AP25-201ENST00000430973 463 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 ELOCP26-201ENST00000436067 329 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 Z74696.2-201ENST00000436514 498 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 SBDSP1-204ENST00000453858 737 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC099563.1-201ENST00000456086 418 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 KLF3P2-201ENST00000465138 268 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC023424.2-201ENST00000493479 777 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms