Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC093311.1-201ENST00000506586 2021 ntBASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.94□□□□□ -1.46
COL25A1Q9BXS0 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 Y_RNA.2-201ENST00000362330 96 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 Y_RNA.314-201ENST00000365114 102 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 COX6B1P1-201ENST00000415962 213 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 RPS17P17-201ENST00000419392 409 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 TIMM9P1-201ENST00000436122 256 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 RPS7P3-201ENST00000443360 580 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AL031584.1-201ENST00000447169 754 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC005297.2-201ENST00000450430 606 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 MTCO3P8-201ENST00000453691 755 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 LINC01399-202ENST00000458450 244 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC079804.1-201ENST00000461922 436 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC087879.1-201ENST00000474343 374 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 RPL32P33-201ENST00000487023 394 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 RN7SL447P-201ENST00000494711 245 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC107393.1-201ENST00000512403 346 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 RNU6-1278P-201ENST00000516130 107 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 RNU6-346P-201ENST00000516288 111 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 RNU6-897P-201ENST00000517135 105 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AF279873.1-201ENST00000523393 313 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AP006587.4-201ENST00000526053 529 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 EDDM3DP-201ENST00000554692 434 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC090751.1-201ENST00000566966 267 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC024614.2-201ENST00000577584 372 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 SNORA70D-201ENST00000578836 135 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC103710.2-201ENST00000609912 942 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AL139099.4-201ENST00000614802 114 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC091905.4-201ENST00000623432 202 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC011455.2-201ENST00000599320 3336 ntBASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.93□□□□□ -1.46
COL25A1Q9BXS0 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC002525.1-201ENST00000624392 1622 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 SPATA31C1-201ENST00000420021 3895 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC022819.1-201ENST00000563495 3910 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 ZNF72P-201ENST00000425869 1908 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 SNORD50.1-201ENST00000362987 71 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 RNY3P13-201ENST00000365542 102 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AP003170.5-201ENST00000397185 335 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC096664.2-201ENST00000411843 406 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 USP9YP30-201ENST00000430729 455 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AL353748.1-201ENST00000440753 474 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 RPL23AP43-201ENST00000446445 471 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 RPL9P32-201ENST00000464118 620 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC105758.1-201ENST00000506038 399 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC004980.4-201ENST00000513375 203 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 EIF3KP3-201ENST00000514461 639 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC021678.3-201ENST00000517893 476 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms