| SALL3 | Q9BXA9 | AC020719.1-201 | ENST00000448977 | 518 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AL355592.1-201 | ENST00000450292 | 386 nt | TSL 2 BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC013269.3-201 | ENST00000450486 | 444 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | SNAP25-AS1-205 | ENST00000453544 | 368 nt | TSL 5 BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | MTCO3P38-201 | ENST00000468910 | 766 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC004924.1-201 | ENST00000480160 | 781 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | RN7SL271P-201 | ENST00000487601 | 295 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | FCF1P3-201 | ENST00000496394 | 590 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC022118.1-201 | ENST00000512352 | 547 nt | TSL 5 BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | RNU6-528P-201 | ENST00000516926 | 100 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC011008.1-201 | ENST00000522026 | 439 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AP001636.3-202 | ENST00000525714 | 894 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC090857.2-201 | ENST00000526362 | 723 nt | TSL 2 BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC090124.2-201 | ENST00000527727 | 563 nt | TSL 4 BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC011092.2-201 | ENST00000533659 | 586 nt | TSL 1 (best) BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC073651.3-201 | ENST00000545999 | 417 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AL390838.2-201 | ENST00000602394 | 274 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC009237.17-201 | ENST00000618111 | 748 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | U6.107-201 | ENST00000637108 | 79 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC119674.1-212 | ENST00000641155 | 993 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | ADGRL4-201 | ENST00000370742 | 3527 nt | APPRIS P1 TSL 1 (best) BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | CHL1-216 | ENST00000620033 | 7311 nt | TSL 1 (best) BASIC | 4.9 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | BMPR2-201 | ENST00000374574 | 9683 nt | TSL 2 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AKAP4-201 | ENST00000358526 | 2881 nt | TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | FAM204A-203 | ENST00000369183 | 13889 nt | APPRIS P1 TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | KCNJ6-201 | ENST00000609713 | 19645 nt | APPRIS P1 TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | PUS7L-207 | ENST00000551923 | 3313 nt | APPRIS P1 TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | LINC01109-201 | ENST00000603837 | 3081 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | TTC21B-AS1-201 | ENST00000440322 | 2260 nt | TSL 4 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | TET2-204 | ENST00000413648 | 4973 nt | TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | TAS2R3-201 | ENST00000247879 | 1101 nt | APPRIS P1 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | MIR448-201 | ENST00000362131 | 111 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | SNORD35B-201 | ENST00000363660 | 87 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | RNU6-185P-201 | ENST00000384421 | 107 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | TRAV23DV6-201 | ENST00000390451 | 409 nt | APPRIS P1 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AL022722.2-201 | ENST00000402519 | 180 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AL121834.1-202 | ENST00000404494 | 277 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | RPS3AP24-201 | ENST00000407896 | 734 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC004014.1-201 | ENST00000413406 | 538 nt | TSL 4 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AL161449.1-201 | ENST00000414531 | 1199 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | LINC02541-201 | ENST00000427157 | 327 nt | TSL 3 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AL596276.1-201 | ENST00000434465 | 418 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | OR4C10P-201 | ENST00000434991 | 931 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AL451129.1-201 | ENST00000437471 | 285 nt | TSL 3 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AL162384.1-201 | ENST00000437881 | 499 nt | TSL 2 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC006037.1-201 | ENST00000437967 | 287 nt | TSL 5 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC091862.1-201 | ENST00000438016 | 1100 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC093155.1-201 | ENST00000440164 | 826 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | ARL5AP2-201 | ENST00000444698 | 533 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | VN1R34P-201 | ENST00000447387 | 883 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | TTTY19-201 | ENST00000453955 | 269 nt | TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AP000942.1-201 | ENST00000463969 | 747 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC073522.1-201 | ENST00000483312 | 377 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | LINC00903-201 | ENST00000497854 | 223 nt | TSL 3 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC027343.1-201 | ENST00000504765 | 407 nt | TSL 4 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | LINC02377-202 | ENST00000505436 | 523 nt | TSL 5 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC018861.2-201 | ENST00000518078 | 513 nt | TSL 2 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AP003733.3-201 | ENST00000524942 | 788 nt | TSL 2 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | KLRF2-201 | ENST00000535540 | 731 nt | APPRIS P1 TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | SDHAF2-205 | ENST00000537782 | 559 nt | TSL 4 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | SNHG1-217 | ENST00000541578 | 588 nt | TSL 3 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | OR7K1P-201 | ENST00000546439 | 926 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC027287.2-201 | ENST00000547559 | 592 nt | TSL 4 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | OR6C7P-201 | ENST00000547875 | 934 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC073655.2-202 | ENST00000547927 | 401 nt | TSL 3 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | LINC02416-201 | ENST00000550019 | 540 nt | TSL 4 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | RPS3AP4-201 | ENST00000555161 | 764 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | ZNF519P3-201 | ENST00000557158 | 1032 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC005154.1-222 | ENST00000579024 | 341 nt | TSL 5 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC087749.1-202 | ENST00000585020 | 566 nt | TSL 2 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AL390816.3-201 | ENST00000604527 | 1066 nt | BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | ABCA9-AS1-203 | ENST00000627596 | 426 nt | TSL 5 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AF067845.5-201 | ENST00000633906 | 437 nt | TSL 3 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC245088.3-201 | ENST00000634383 | 424 nt | APPRIS P1 BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | FLG-AS1-205 | ENST00000445097 | 2857 nt | TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | MYB-213 | ENST00000525369 | 2866 nt | TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | KCNRG-202 | ENST00000360473 | 1623 nt | TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | MTUS1-201 | ENST00000262102 | 6160 nt | TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC100871.1-201 | ENST00000507871 | 1456 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AL354733.2-209 | ENST00000589233 | 1434 nt | TSL 2 BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | STXBP4-204 | ENST00000434978 | 2807 nt | TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | LRRTM4-201 | ENST00000409088 | 3616 nt | TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | MTND4P31-201 | ENST00000425607 | 1343 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | SMC2-AS1-201 | ENST00000603487 | 7020 nt | TSL 2 BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | FMO2-201 | ENST00000209929 | 3851 nt | APPRIS P1 TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | RASAL2-203 | ENST00000462775 | 14453 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | HMGB1P5-201 | ENST00000255320 | 642 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | Y_RNA.126-201 | ENST00000363382 | 111 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | RNU6-666P-201 | ENST00000363499 | 107 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | SEC61A2-203 | ENST00000379017 | 600 nt | TSL 5 BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | GUCA1C-202 | ENST00000393963 | 900 nt | TSL 1 (best) BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | MIR1193-201 | ENST00000408109 | 78 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | RNU6-77P-201 | ENST00000410554 | 91 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | RNA5SP498-201 | ENST00000411342 | 120 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | RPS7P13-201 | ENST00000413955 | 498 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC007349.1-201 | ENST00000419326 | 587 nt | TSL 4 BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AL023581.1-201 | ENST00000423500 | 455 nt | TSL 2 BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | MTND4P28-201 | ENST00000426217 | 387 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | RPS26P47-201 | ENST00000427219 | 348 nt | BASIC | 4.88 | □□□□□ -1.63 | | |
| SALL3 | Q9BXA9 | AC023590.1-205 | ENST00000430457 | 676 nt | TSL 3 BASIC | 4.88 | □□□□□ -1.63 | | |