Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNU6-1158P-201ENST00000391167 107 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 FGF7P8-201ENST00000402994 292 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AL591416.1-201ENST00000404015 867 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 DUTP5-201ENST00000406790 469 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 SPTLC1P2-201ENST00000407089 121 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC009237.5-201ENST00000414271 501 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 RAC1P6-201ENST00000423911 575 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC099670.2-201ENST00000435130 321 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 RPL36AP6-201ENST00000435770 321 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC016691.1-201ENST00000441321 413 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 HMGB3P30-201ENST00000457863 606 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC025465.4-201ENST00000513422 638 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 GMPSP1-201ENST00000514075 579 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC105417.1-201ENST00000514691 285 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 SNORA40.12-201ENST00000516329 111 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 RNU6-358P-201ENST00000516564 75 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 RNU6-1092P-201ENST00000516955 87 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 SNORA31.20-201ENST00000517111 133 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AP001646.1-201ENST00000527936 915 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC126177.5-201ENST00000549599 178 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AL049779.2-201ENST00000553847 315 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 MIR4293-201ENST00000584305 78 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AL357078.3-201ENST00000607528 618 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC000068.2-201ENST00000608816 460 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC015967.1-201ENST00000619893 476 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 CASC19-280ENST00000642102 1351 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC139769.1-204ENST00000472297 1931 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 RNU6-179P-201ENST00000363350 107 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 SNORD37.1-201ENST00000390968 65 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AL109913.1-201ENST00000421173 514 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC007161.1-204ENST00000423039 460 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 VTI1BP4-201ENST00000427516 527 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC012158.1-204ENST00000483430 465 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 PGAM1P13-201ENST00000507497 754 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 DEFB109D-201ENST00000529497 240 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 BNIP3P5-201ENST00000562290 498 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC019322.1-201ENST00000571869 389 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC010591.1-201ENST00000603941 649 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AL121992.2-201ENST00000606262 256 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC211433.2-201ENST00000608433 387 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 DISC2.1-201ENST00000612827 205 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 MTND5P17-201ENST00000418405 1603 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 AC093591.2-201ENST00000565254 3843 ntBASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.06□□□□□ -1.44
TRAIPQ9BWF2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 LINC01109-201ENST00000603837 3081 ntBASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 XIAPP3-201ENST00000312918 795 ntBASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 Y_RNA.38-201ENST00000362617 102 ntBASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 RNU6-996P-201ENST00000365438 107 ntBASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 AL009179.1-201ENST00000406085 265 ntBASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 DPPA2P3-201ENST00000411853 655 ntBASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 SNRPFP1-201ENST00000414761 252 ntBASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 RPL7L1P9-201ENST00000431298 745 ntBASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 GTF2IP20-201ENST00000431663 360 ntBASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 NEK4P1-201ENST00000433383 879 ntBASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 RPS15AP9-201ENST00000439856 381 ntBASIC6.05□□□□□ -1.44
TRAIPQ9BWF2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms