Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL121895.2-201ENST00000619558 447 ntBASIC2.86□□□□□ -1.95
HDHD3Q9BSH5 AC006065.5-201ENST00000623427 349 ntBASIC2.86□□□□□ -1.95
HDHD3Q9BSH5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HDHD3Q9BSH5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HDHD3Q9BSH5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HDHD3Q9BSH5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.86□□□□□ -1.95
HDHD3Q9BSH5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
HDHD3Q9BSH5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC000367.1-201ENST00000452711 1766 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 MFSD8-233ENST00000641482 4860 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 SKINT1L-201ENST00000401057 817 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 PTP4A1P5-201ENST00000420305 455 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 ARF4P2-201ENST00000430209 526 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC005345.1-201ENST00000431868 217 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 GTF2IP7-202ENST00000436677 309 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 HMGB3P11-201ENST00000440127 604 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 RRM2P4-201ENST00000441721 562 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 CEACAMP4-201ENST00000457676 421 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 PLGLA-201ENST00000465668 449 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC104164.3-201ENST00000467363 1258 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC005726.1-201ENST00000494679 427 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC021146.5-201ENST00000503544 545 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC104057.1-201ENST00000515547 497 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 RNU6-276P-201ENST00000516114 96 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 SNORA64.4-201ENST00000516632 81 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 IGKV2-23-201ENST00000518729 323 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AP001207.1-201ENST00000524051 481 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 PDCL2P2-201ENST00000533651 189 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 PARP1P2-201ENST00000556806 195 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 MIR4504-201ENST00000577413 92 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC022069.1-201ENST00000582910 658 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 SNORD39.3-201ENST00000584451 71 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC022916.3-201ENST00000592961 742 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC245884.10-201ENST00000597355 337 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 YWHAQP7-201ENST00000603536 658 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC010591.1-201ENST00000603941 649 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC073387.2-201ENST00000604797 784 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC112220.2-201ENST00000605513 533 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AL365400.2-201ENST00000605604 902 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AL138478.1-201ENST00000612252 832 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC138649.5-201ENST00000637456 137 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 AC013437.2-201ENST00000639587 677 ntBASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
HDHD3Q9BSH5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 SNORD56.3-201ENST00000363507 71 ntBASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 RNA5SP167-201ENST00000365461 116 ntBASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 GTF2IP23-201ENST00000423746 351 ntBASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 RAC1P8-201ENST00000427086 527 ntBASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 ELOCP6-201ENST00000429066 328 ntBASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 AL138799.3-201ENST00000438968 350 ntBASIC2.84□□□□□ -1.95
HDHD3Q9BSH5 MTCO1P53-201ENST00000441633 699 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms