Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AL359212.1-201ENST00000556608 614 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC138915.2-201ENST00000569776 97 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC234771.5-201ENST00000600161 514 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC124312.5-201ENST00000604451 268 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 RMST_3.1-201ENST00000611651 109 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AL139089.1-201ENST00000620372 975 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AL672167.1-204ENST00000641875 3017 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC108467.2-201ENST00000617640 1597 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 MAPK10-320ENST00000641462 6696 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC092162.3-201ENST00000624511 1624 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 MTND4P27-201ENST00000450813 1354 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 Y_RNA.1-201ENST00000352915 104 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 RN7SKP115-201ENST00000363177 317 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-809P-201ENST00000384461 107 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 MIR1271-201ENST00000408537 86 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 ZNF90P2-204ENST00000419323 1075 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 SKP1P3-201ENST00000429280 487 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC022022.1-201ENST00000430304 178 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 FCF1P1-201ENST00000432690 571 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AL353093.1-201ENST00000441292 436 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 FHP1-201ENST00000442741 703 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AL162591.2-201ENST00000449634 317 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 RNA5SP249-201ENST00000516127 99 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AP003122.4-201ENST00000530980 758 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC087477.6-201ENST00000559595 843 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC020661.2-201ENST00000560114 134 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AL355375.2-201ENST00000574825 175 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 RN7SL652P-201ENST00000577769 300 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 MIR4330-201ENST00000579077 105 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 BNIP3P22-201ENST00000593399 556 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 RPL12P25-202ENST00000598100 674 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AL390838.2-201ENST00000602394 274 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AL391646.1-201ENST00000603860 190 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC115286.1-201ENST00000604298 434 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC112191.3-201ENST00000604371 277 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AL136363.1-201ENST00000605349 337 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC008121.3-201ENST00000618726 433 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC079684.1-201ENST00000621405 437 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC015908.5-201ENST00000623289 343 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 AC010300.1-201ENST00000600671 5134 ntBASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDK5RAP1Q96SZ6 DHX9P1-201ENST00000436565 3076 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 MTCO1P6-201ENST00000481192 1384 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC138915.3-201ENST00000562908 1389 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC090971.4-201ENST00000560291 1800 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AL590240.1-201ENST00000334118 313 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-839P-201ENST00000363347 108 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 Y_RNA.216-201ENST00000364205 93 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 SNORA63C-201ENST00000364578 129 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 SNORA71.2-201ENST00000364941 134 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-452P-201ENST00000384406 107 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-738P-201ENST00000384531 106 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU1-82P-201ENST00000390851 165 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-907P-201ENST00000390924 102 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-1300P-201ENST00000391046 108 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms