Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 VTA1P1-201ENST00000414044 866 ntBASIC4.27□□□□□ -1.73
IFT140Q96RY7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.27□□□□□ -1.73
IFT140Q96RY7 HMGN1P5-201ENST00000448591 263 ntBASIC4.27□□□□□ -1.73
IFT140Q96RY7 AC004801.2-202ENST00000463559 283 ntBASIC4.27□□□□□ -1.73
IFT140Q96RY7 AC025181.1-201ENST00000477507 416 ntBASIC4.27□□□□□ -1.73
IFT140Q96RY7 AC132942.1-201ENST00000486753 483 ntBASIC4.27□□□□□ -1.73
IFT140Q96RY7 AC118282.1-201ENST00000506408 765 ntBASIC4.27□□□□□ -1.73
IFT140Q96RY7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.27□□□□□ -1.73
IFT140Q96RY7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.27□□□□□ -1.73
IFT140Q96RY7 AC068313.1-201ENST00000604028 1008 ntBASIC4.27□□□□□ -1.73
IFT140Q96RY7 AC004696.1-201ENST00000614345 607 ntBASIC4.27□□□□□ -1.73
IFT140Q96RY7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
IFT140Q96RY7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
IFT140Q96RY7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.27□□□□□ -1.73
IFT140Q96RY7 OR4G2P-202ENST00000641004 1759 ntBASIC4.27□□□□□ -1.73
IFT140Q96RY7 Y_RNA.226-201ENST00000364337 114 ntBASIC4.26□□□□□ -1.73
IFT140Q96RY7 AC019155.1-201ENST00000382242 574 ntBASIC4.26□□□□□ -1.73
IFT140Q96RY7 MIR1183-201ENST00000408856 89 ntBASIC4.26□□□□□ -1.73
IFT140Q96RY7 RNA5SP107-201ENST00000411358 122 ntBASIC4.26□□□□□ -1.73
IFT140Q96RY7 AC107081.1-201ENST00000414975 361 ntBASIC4.26□□□□□ -1.73
IFT140Q96RY7 GTF2IP23-201ENST00000423746 351 ntBASIC4.26□□□□□ -1.73
IFT140Q96RY7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.26□□□□□ -1.73
IFT140Q96RY7 AL662791.1-201ENST00000441992 928 ntBASIC4.26□□□□□ -1.73
IFT140Q96RY7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.26□□□□□ -1.73
IFT140Q96RY7 CYCSP20-201ENST00000473154 315 ntBASIC4.26□□□□□ -1.73
IFT140Q96RY7 RN7SKP43-201ENST00000516173 320 ntBASIC4.26□□□□□ -1.73
IFT140Q96RY7 AC092851.1-201ENST00000535964 478 ntBASIC4.26□□□□□ -1.73
IFT140Q96RY7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.26□□□□□ -1.73
IFT140Q96RY7 AC004972.1-201ENST00000623934 2209 ntBASIC4.25□□□□□ -1.73
IFT140Q96RY7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
IFT140Q96RY7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
IFT140Q96RY7 AC107015.1-201ENST00000466902 747 ntBASIC4.25□□□□□ -1.73
IFT140Q96RY7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.25□□□□□ -1.73
IFT140Q96RY7 SNORA64.4-201ENST00000516632 81 ntBASIC4.25□□□□□ -1.73
IFT140Q96RY7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.25□□□□□ -1.73
IFT140Q96RY7 AC044913.1-201ENST00000557200 430 ntBASIC4.25□□□□□ -1.73
IFT140Q96RY7 MIR3605-201ENST00000583214 100 ntBASIC4.25□□□□□ -1.73
IFT140Q96RY7 NRBF2P1-201ENST00000587407 859 ntBASIC4.25□□□□□ -1.73
IFT140Q96RY7 ADAM3A-203ENST00000461344 2157 ntBASIC4.25□□□□□ -1.73
IFT140Q96RY7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
IFT140Q96RY7 RNU2-22P-201ENST00000411266 212 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 AC007064.1-201ENST00000412238 351 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 MTCO1P39-201ENST00000426148 480 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 MTCYBP19-201ENST00000517463 1124 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 AC091515.1-201ENST00000548110 679 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 CKS1BP1-201ENST00000555221 240 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 SNORA35B-201ENST00000607417 129 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
IFT140Q96RY7 SPATA2P1-201ENST00000431223 2055 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 RPS7P13-201ENST00000413955 498 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 AP001086.1-201ENST00000494882 321 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 MTND4P2-201ENST00000507767 1203 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 RN7SKP282-201ENST00000516824 299 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 AC022884.3-201ENST00000579571 248 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.24□□□□□ -1.73
IFT140Q96RY7 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.24□□□□□ -1.73
IFT140Q96RY7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
IFT140Q96RY7 AC109315.1-201ENST00000584143 1347 ntBASIC4.23□□□□□ -1.73
IFT140Q96RY7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.23□□□□□ -1.73
IFT140Q96RY7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC4.23□□□□□ -1.73
IFT140Q96RY7 RN7SKP285-201ENST00000410137 318 ntBASIC4.23□□□□□ -1.73
IFT140Q96RY7 RPS12P23-201ENST00000419579 400 ntBASIC4.23□□□□□ -1.73
IFT140Q96RY7 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.23□□□□□ -1.73
IFT140Q96RY7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC4.23□□□□□ -1.73
IFT140Q96RY7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
IFT140Q96RY7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC4.22□□□□□ -1.73
IFT140Q96RY7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFT140Q96RY7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.22□□□□□ -1.73
IFT140Q96RY7 RNA5SP383-201ENST00000362934 120 ntBASIC4.22□□□□□ -1.73
IFT140Q96RY7 AC245291.1-201ENST00000419501 328 ntBASIC4.22□□□□□ -1.73
IFT140Q96RY7 BTG3P1-201ENST00000435859 716 ntBASIC4.22□□□□□ -1.73
IFT140Q96RY7 RPL21P41-201ENST00000459863 264 ntBASIC4.22□□□□□ -1.73
IFT140Q96RY7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.22□□□□□ -1.73
IFT140Q96RY7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
IFT140Q96RY7 OR5AK3P-201ENST00000527486 1297 ntBASIC4.22□□□□□ -1.73
IFT140Q96RY7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.22□□□□□ -1.73
IFT140Q96RY7 AL353997.5-201ENST00000618886 171 ntBASIC4.22□□□□□ -1.73
IFT140Q96RY7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFT140Q96RY7 AC104454.1-201ENST00000421341 1401 ntBASIC4.22□□□□□ -1.73
IFT140Q96RY7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
IFT140Q96RY7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
IFT140Q96RY7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
IFT140Q96RY7 AL161781.1-201ENST00000354277 403 ntBASIC4.21□□□□□ -1.74
IFT140Q96RY7 AL357520.1-201ENST00000441557 453 ntBASIC4.21□□□□□ -1.74
IFT140Q96RY7 OR4G11P-201ENST00000492842 939 ntBASIC4.21□□□□□ -1.74
IFT140Q96RY7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.21□□□□□ -1.74
IFT140Q96RY7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.21□□□□□ -1.74
IFT140Q96RY7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms