Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS35Q96QK1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS35Q96QK1 AC091286.1-201ENST00000431233 461 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 AL050321.1-201ENST00000432363 400 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 MTCYBP15-201ENST00000433123 1127 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 HSPD1P21-201ENST00000436541 245 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS35Q96QK1 AC092641.1-201ENST00000440229 772 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 AC239367.2-201ENST00000447309 705 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS35Q96QK1 AC104073.1-201ENST00000451988 151 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 NDUFA5P7-201ENST00000452914 242 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 RBMY2UP-201ENST00000453474 324 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 snoU13.3-201ENST00000459441 104 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.52□□□□□ -1.85
VPS35Q96QK1 AC015908.1-201ENST00000478739 476 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 RN7SKP13-201ENST00000515933 244 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 RNU2-27P-201ENST00000516185 142 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 SNORA70.18-201ENST00000516696 98 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 RN7SKP116-201ENST00000516902 319 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 MTCYBP41-201ENST00000528913 1123 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS35Q96QK1 AC103843.2-201ENST00000530523 682 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS35Q96QK1 UBE2NP1-201ENST00000545592 458 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 AL121576.1-201ENST00000556055 276 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS35Q96QK1 ZNF971P-201ENST00000562068 1249 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.52□□□□□ -1.85
VPS35Q96QK1 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS35Q96QK1 RPAP2P1-201ENST00000603626 1168 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 AL513477.2-201ENST00000607858 568 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS35Q96QK1 VN1R7P-201ENST00000619242 903 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.52□□□□□ -1.85
VPS35Q96QK1 MIR4278-201ENST00000636094 69 ntBASIC3.52□□□□□ -1.85
VPS35Q96QK1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS35Q96QK1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS35Q96QK1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS35Q96QK1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS35Q96QK1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS35Q96QK1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS35Q96QK1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 AF127577.6-201ENST00000623352 2191 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS35Q96QK1 RNU5B-4P-201ENST00000363508 111 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC234772.1-201ENST00000377927 937 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 RNU6-339P-201ENST00000384310 107 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 MIR607-201ENST00000385241 96 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 MCTS2P-201ENST00000394552 546 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS35Q96QK1 AL121972.1-201ENST00000402023 252 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AL391417.1-201ENST00000404100 426 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 RNU2-37P-201ENST00000410695 177 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 RN7SKP53-201ENST00000411337 315 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 RPL31P12-201ENST00000422587 358 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 RPL21P112-201ENST00000434403 463 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 RPL21P23-201ENST00000446654 460 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 PDSS1P2-201ENST00000449397 678 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 HMGB1P38-201ENST00000490557 577 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 SETP14-201ENST00000497538 873 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC093801.2-201ENST00000503966 1050 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC026414.1-201ENST00000504046 698 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC016550.1-201ENST00000505348 785 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 MTCO3P44-201ENST00000510977 541 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC010265.1-201ENST00000513509 211 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 RN7SKP157-201ENST00000516174 282 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 RNU6-885P-201ENST00000516607 104 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 RNA5SP135-201ENST00000517019 125 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 AP006245.1-201ENST00000522549 120 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS35Q96QK1 AP000790.1-201ENST00000528891 737 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AP003385.6-201ENST00000531603 374 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 SNORD39.3-201ENST00000584451 71 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 AP001542.2-201ENST00000593141 364 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 VN1R87P-201ENST00000596706 487 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC099778.2-201ENST00000610904 211 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC006249.1-201ENST00000621223 471 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC018816.2-201ENST00000621460 353 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 AC243312.2-201ENST00000623340 601 ntBASIC3.51□□□□□ -1.85
VPS35Q96QK1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS35Q96QK1 AL133383.2-201ENST00000622958 2336 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms