Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.41□□□□□ -1.54
CHAMP1Q96JM3 AP002907.1-201ENST00000606361 1430 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC008033.1-201ENST00000216407 1162 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC126755.2-208ENST00000327792 462 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC138969.1-213ENST00000331436 462 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 RNA5SP388-201ENST00000362584 119 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 RNU6-921P-201ENST00000384361 107 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 SNORA11.2-201ENST00000408318 127 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 RNU2-41P-201ENST00000410991 178 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 PRELID3BP11-201ENST00000414230 479 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 BX295541.1-201ENST00000417774 250 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 USP12PX-201ENST00000432383 1057 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 RPL10P17-201ENST00000453852 316 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC005008.1-201ENST00000456151 612 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC026402.1-201ENST00000513642 170 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 RNU6-507P-201ENST00000516045 100 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 RNU2-46P-201ENST00000517038 113 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 OR4R3P-201ENST00000525084 838 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 FAM92A1P1-201ENST00000528023 890 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 LARP7P2-201ENST00000575306 125 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC068790.4-201ENST00000602474 263 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC140113.4-201ENST00000622087 222 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 PISRT1-201ENST00000626175 531 ntBASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.4□□□□□ -1.54
CHAMP1Q96JM3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CHAMP1Q96JM3 SAMMSON-226ENST00000642089 1582 ntBASIC5.4□□□□□ -1.55
CHAMP1Q96JM3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.4□□□□□ -1.55
CHAMP1Q96JM3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHAMP1Q96JM3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CHAMP1Q96JM3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CHAMP1Q96JM3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.4□□□□□ -1.55
CHAMP1Q96JM3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHAMP1Q96JM3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHAMP1Q96JM3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHAMP1Q96JM3 MAPK10-263ENST00000641052 4307 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AC019072.1-201ENST00000604535 1551 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 RNU6-1090P-201ENST00000364065 94 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 Y_RNA.402-201ENST00000383972 102 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 RNU6-1103P-201ENST00000384150 107 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 DHFRP6-201ENST00000401776 268 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 RNU2-50P-201ENST00000410494 143 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AL139413.1-201ENST00000421309 217 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 USP9YP36-201ENST00000424581 829 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AC104651.2-201ENST00000447549 528 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 DPPA3P1-201ENST00000448050 469 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 ARPC3P5-201ENST00000448802 534 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AC079448.1-201ENST00000449377 373 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AMD1P1-201ENST00000457220 922 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 RPL31P50-201ENST00000471002 296 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 RPL7AP10-201ENST00000481016 791 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 RPL21P129-201ENST00000491732 478 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AC112204.1-201ENST00000502591 103 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 AC140172.1-201ENST00000502928 141 ntBASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.39□□□□□ -1.55
CHAMP1Q96JM3 RNU6-1003P-201ENST00000517099 105 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms