Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LRCH3Q96II8 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 SNORD81.1-201ENST00000363064 77 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 RNU6-804P-201ENST00000384286 107 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 SNORA22C-201ENST00000384614 134 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 RNU6-174P-201ENST00000410406 106 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 AC016397.1-201ENST00000412463 242 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 AL139148.1-201ENST00000427122 680 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 RPL36AP13-201ENST00000457490 317 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 AP000942.1-201ENST00000463969 747 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 RPS23P5-201ENST00000495419 428 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 RNU6-64P-201ENST00000517119 105 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 AC009643.1-201ENST00000532030 391 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 AL133153.1-201ENST00000557756 303 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 AC111186.1-201ENST00000604684 130 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 AL049539.1-201ENST00000611964 459 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 MIR378J-201ENST00000611988 109 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 MIR1244-1-201ENST00000612829 85 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 MIR1244-3-201ENST00000635744 85 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 MIR1244-2-201ENST00000636449 85 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 MIR1244-4-202ENST00000636813 85 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
LRCH3Q96II8 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
LRCH3Q96II8 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
LRCH3Q96II8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LRCH3Q96II8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LRCH3Q96II8 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LRCH3Q96II8 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 OFD1P17-201ENST00000437639 3018 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 Y_RNA.8-201ENST00000362353 102 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 RNA5SP46-201ENST00000362370 120 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 Y_RNA.16-201ENST00000362421 102 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 SNORD16-201ENST00000362803 99 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 RN7SKP124-201ENST00000364730 341 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 RNU6-715P-201ENST00000365204 103 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 AC091390.1-201ENST00000433904 331 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 AC004866.2-201ENST00000438285 481 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 AL031659.1-201ENST00000447075 539 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 RN7SL817P-201ENST00000480777 288 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 ATP5LP5-201ENST00000483050 299 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 RN7SL714P-201ENST00000487050 298 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 RPL7P23-201ENST00000493874 747 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 AP001086.1-201ENST00000494882 321 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 RN7SKP66-201ENST00000516681 231 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 RNU6-798P-201ENST00000516912 103 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 SNORA31.18-201ENST00000517043 134 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 MIR4436B2-201ENST00000581415 91 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 MIR4436B1-201ENST00000583272 91 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 AC087575.1-201ENST00000585087 229 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 Z83818.1-201ENST00000603584 150 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 CYCSP1-201ENST00000604815 315 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 AC068870.2-201ENST00000620635 389 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 HSPD1P8-201ENST00000400121 1658 ntBASIC6.73□□□□□ -1.33
LRCH3Q96II8 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms