Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TOPBP1Q92547 RPL31P12-201ENST00000422587 358 ntBASIC4.19□□□□□ -1.74
TOPBP1Q92547 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
TOPBP1Q92547 AC133473.1-201ENST00000455173 299 ntBASIC4.19□□□□□ -1.74
TOPBP1Q92547 AC105918.1-201ENST00000474399 838 ntBASIC4.19□□□□□ -1.74
TOPBP1Q92547 AC132942.1-201ENST00000486753 483 ntBASIC4.19□□□□□ -1.74
TOPBP1Q92547 RPL9P6-201ENST00000492764 598 ntBASIC4.19□□□□□ -1.74
TOPBP1Q92547 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.19□□□□□ -1.74
TOPBP1Q92547 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.19□□□□□ -1.74
TOPBP1Q92547 AC245166.1-201ENST00000521012 253 ntBASIC4.19□□□□□ -1.74
TOPBP1Q92547 AL355836.1-201ENST00000555951 870 ntBASIC4.19□□□□□ -1.74
TOPBP1Q92547 AADACP1-206ENST00000561502 1193 ntBASIC4.19□□□□□ -1.74
TOPBP1Q92547 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.19□□□□□ -1.74
TOPBP1Q92547 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
TOPBP1Q92547 AC117529.2-201ENST00000512159 2068 ntBASIC4.19□□□□□ -1.74
TOPBP1Q92547 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TOPBP1Q92547 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.18□□□□□ -1.74
TOPBP1Q92547 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TOPBP1Q92547 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TOPBP1Q92547 HMGB1P25-201ENST00000468402 607 ntBASIC4.18□□□□□ -1.74
TOPBP1Q92547 AP001086.1-201ENST00000494882 321 ntBASIC4.18□□□□□ -1.74
TOPBP1Q92547 VWA8P1-201ENST00000510889 176 ntBASIC4.18□□□□□ -1.74
TOPBP1Q92547 AC090281.1-201ENST00000523019 276 ntBASIC4.18□□□□□ -1.74
TOPBP1Q92547 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.18□□□□□ -1.74
TOPBP1Q92547 RANP3-201ENST00000530970 276 ntBASIC4.18□□□□□ -1.74
TOPBP1Q92547 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.18□□□□□ -1.74
TOPBP1Q92547 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TOPBP1Q92547 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TOPBP1Q92547 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.18□□□□□ -1.74
TOPBP1Q92547 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TOPBP1Q92547 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TOPBP1Q92547 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TOPBP1Q92547 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.17□□□□□ -1.74
TOPBP1Q92547 AL133271.1-201ENST00000538229 291 ntBASIC4.17□□□□□ -1.74
TOPBP1Q92547 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.17□□□□□ -1.74
TOPBP1Q92547 NF1P10-201ENST00000613227 742 ntBASIC4.17□□□□□ -1.74
TOPBP1Q92547 Z99129.2-201ENST00000619967 314 ntBASIC4.17□□□□□ -1.74
TOPBP1Q92547 AC092184.1-201ENST00000625042 715 ntBASIC4.17□□□□□ -1.74
TOPBP1Q92547 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TOPBP1Q92547 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.17□□□□□ -1.74
TOPBP1Q92547 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TOPBP1Q92547 AC104454.1-201ENST00000421341 1401 ntBASIC4.17□□□□□ -1.74
TOPBP1Q92547 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TOPBP1Q92547 RNU6-805P-201ENST00000365643 106 ntBASIC4.16□□□□□ -1.74
TOPBP1Q92547 VTA1P1-201ENST00000414044 866 ntBASIC4.16□□□□□ -1.74
TOPBP1Q92547 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.16□□□□□ -1.74
TOPBP1Q92547 DYNLL1P6-201ENST00000503440 264 ntBASIC4.16□□□□□ -1.74
TOPBP1Q92547 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.16□□□□□ -1.74
TOPBP1Q92547 RN7SKP31-201ENST00000516354 278 ntBASIC4.16□□□□□ -1.74
TOPBP1Q92547 AC022884.3-201ENST00000579571 248 ntBASIC4.16□□□□□ -1.74
TOPBP1Q92547 WARS-244ENST00000627608 123 ntTSL 5 BASIC4.16□□□□□ -1.74
TOPBP1Q92547 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
TOPBP1Q92547 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TOPBP1Q92547 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.16□□□□□ -1.74
TOPBP1Q92547 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.16□□□□□ -1.74
TOPBP1Q92547 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.16□□□□□ -1.74
TOPBP1Q92547 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TOPBP1Q92547 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TOPBP1Q92547 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TOPBP1Q92547 AL590399.6-201ENST00000446396 307 ntBASIC4.16□□□□□ -1.74
TOPBP1Q92547 CKS1BP2-201ENST00000497342 240 ntBASIC4.16□□□□□ -1.74
TOPBP1Q92547 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.16□□□□□ -1.74
TOPBP1Q92547 SNORA31.1-201ENST00000515993 133 ntBASIC4.16□□□□□ -1.74
TOPBP1Q92547 SNORA31.5-201ENST00000516190 133 ntBASIC4.16□□□□□ -1.74
TOPBP1Q92547 RNA5SP281-201ENST00000516504 135 ntBASIC4.16□□□□□ -1.74
TOPBP1Q92547 AL358913.1-201ENST00000554342 121 ntBASIC4.16□□□□□ -1.74
TOPBP1Q92547 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
TOPBP1Q92547 MIR423-201ENST00000362201 94 ntBASIC4.15□□□□□ -1.75
TOPBP1Q92547 RNU1-100P-201ENST00000365255 165 ntBASIC4.15□□□□□ -1.75
TOPBP1Q92547 RPL21P3-201ENST00000395517 478 ntBASIC4.15□□□□□ -1.75
TOPBP1Q92547 AC146507.2-201ENST00000460608 476 ntBASIC4.15□□□□□ -1.75
TOPBP1Q92547 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.15□□□□□ -1.75
TOPBP1Q92547 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TOPBP1Q92547 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.15□□□□□ -1.75
TOPBP1Q92547 NRBF2P1-201ENST00000587407 859 ntBASIC4.15□□□□□ -1.75
TOPBP1Q92547 AC083760.1-201ENST00000589621 670 ntBASIC4.15□□□□□ -1.75
TOPBP1Q92547 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TOPBP1Q92547 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TOPBP1Q92547 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TOPBP1Q92547 XKRY2-202ENST00000623874 1581 ntBASIC4.14□□□□□ -1.75
TOPBP1Q92547 XKRY-202ENST00000624960 1581 ntBASIC4.14□□□□□ -1.75
TOPBP1Q92547 AC091564.4-201ENST00000533934 2194 ntBASIC4.14□□□□□ -1.75
TOPBP1Q92547 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC4.14□□□□□ -1.75
TOPBP1Q92547 Y_RNA.4-201ENST00000362333 112 ntBASIC4.14□□□□□ -1.75
TOPBP1Q92547 AL355379.1-201ENST00000405542 640 ntBASIC4.14□□□□□ -1.75
TOPBP1Q92547 AL583834.1-201ENST00000406943 343 ntBASIC4.14□□□□□ -1.75
TOPBP1Q92547 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.14□□□□□ -1.75
TOPBP1Q92547 SEPT7P6-201ENST00000469999 1143 ntBASIC4.14□□□□□ -1.75
TOPBP1Q92547 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.14□□□□□ -1.75
TOPBP1Q92547 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.14□□□□□ -1.75
TOPBP1Q92547 AP001317.1-201ENST00000531194 960 ntBASIC4.14□□□□□ -1.75
TOPBP1Q92547 AC122134.1-201ENST00000565664 1104 ntBASIC4.14□□□□□ -1.75
TOPBP1Q92547 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.14□□□□□ -1.75
TOPBP1Q92547 AC046143.2-201ENST00000609789 160 ntBASIC4.14□□□□□ -1.75
TOPBP1Q92547 CRYM-AS1-204ENST00000637983 556 ntBASIC4.14□□□□□ -1.75
TOPBP1Q92547 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TOPBP1Q92547 SNORA70E-201ENST00000384492 135 ntBASIC4.13□□□□□ -1.75
TOPBP1Q92547 RNU6-253P-201ENST00000384730 105 ntBASIC4.13□□□□□ -1.75
TOPBP1Q92547 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.13□□□□□ -1.75
TOPBP1Q92547 HMGB1P15-201ENST00000453854 435 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms