Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 COX6CP17-201ENST00000421389 185 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 MTND5P14-201ENST00000441481 1267 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 CEACAMP9-201ENST00000442990 513 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC011753.3-201ENST00000443436 406 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC244505.5-201ENST00000443639 207 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 PAXBP1P1-201ENST00000449315 447 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 DHFRP3-201ENST00000455595 559 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 snoU109.1-201ENST00000459339 135 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC087879.1-201ENST00000474343 374 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC022447.3-201ENST00000506865 495 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC108064.1-201ENST00000513791 460 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 RNU6-1178P-201ENST00000516674 107 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 HSPA8P13-201ENST00000523715 472 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 OR5M7P-201ENST00000526140 972 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AP001180.3-201ENST00000582221 145 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AL354984.3-201ENST00000604803 325 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC007684.1-201ENST00000609671 477 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC108479.2-201ENST00000617314 601 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AL139089.1-201ENST00000620372 975 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 SEPT14P19-203ENST00000633205 211 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 MTND5P26-201ENST00000426018 1752 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 Z95327.2-201ENST00000414579 1873 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 RNU6-289P-201ENST00000364093 107 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 RNU5A-6P-201ENST00000384136 116 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 ARF4P3-201ENST00000397387 509 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 ZNF603P-201ENST00000405613 487 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 TPMTP2-201ENST00000414372 726 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 Z97055.1-201ENST00000419730 712 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 MTND4LP11-201ENST00000422184 280 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AL513174.1-201ENST00000423182 629 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 NANOGNBP1-201ENST00000448444 480 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 OR6K1P-201ENST00000456766 971 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC053481.1-201ENST00000467217 306 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 OR52A4P-201ENST00000472867 958 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AL358832.1-201ENST00000497800 389 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC024589.1-201ENST00000512207 263 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 MTND4LP18-201ENST00000526864 291 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 CCNG2P1-201ENST00000549521 1000 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 MIR4504-201ENST00000577413 92 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC093765.1-201ENST00000603758 881 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC079587.1-201ENST00000603846 277 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC112191.3-201ENST00000604371 277 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC098614.4-201ENST00000607601 462 ntBASIC4.48□□□□□ -1.69
ATG4AQ8WYN0 AC104010.1-201ENST00000616889 150 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms