Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC024257.5-201ENST00000612739 531 ntBASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 AC008083.4-201ENST00000615076 444 ntBASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 AL391262.2-201ENST00000622466 494 ntBASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 AL354798.1-201ENST00000622505 329 ntBASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 AC048347.1-201ENST00000624621 427 ntBASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 CR381572.1-201ENST00000625098 102 ntBASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 RNA5SP196-201ENST00000625967 102 ntBASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 AC024560.2-201ENST00000507981 1497 ntBASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.85□□□□□ -1.79
TRAF3IP1Q8TDR0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 RNU6-837P-201ENST00000391056 108 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AL121972.1-201ENST00000402023 252 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AL024474.1-201ENST00000404655 591 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 RPL7P44-201ENST00000424827 742 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 RPL7P2-201ENST00000427639 268 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 MOB1AP1-201ENST00000430903 535 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 NPM1P49-201ENST00000448027 714 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AC013828.1-201ENST00000481845 158 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AC113420.1-201ENST00000507903 571 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 SCARNA14-201ENST00000516903 136 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 RNU6-1261P-201ENST00000517194 104 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 OR7E13P-201ENST00000526052 910 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AC008011.1-201ENST00000545989 227 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AC136624.4-201ENST00000573044 370 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 DPRXP5-201ENST00000604662 539 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AC090912.3-201ENST00000609775 533 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AC073968.1-201ENST00000618594 637 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AC009318.4-201ENST00000620496 486 ntBASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAF3IP1Q8TDR0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
TRAF3IP1Q8TDR0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRAF3IP1Q8TDR0 AC010733.2-201ENST00000589496 5702 ntBASIC3.84□□□□□ -1.8
TRAF3IP1Q8TDR0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
TRAF3IP1Q8TDR0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
TRAF3IP1Q8TDR0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 SNORA31-201ENST00000362607 130 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 RNA5SP189-201ENST00000364920 115 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 RNU6-761P-201ENST00000384148 107 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 RPL31P1-201ENST00000398116 372 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 FNDC3CP-201ENST00000420795 1155 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AL139247.1-201ENST00000422768 325 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AC239367.2-201ENST00000447309 705 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AL031313.1-201ENST00000448435 256 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AC010655.1-201ENST00000449336 292 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 RNU7-170P-201ENST00000459303 61 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AC090502.2-201ENST00000549267 280 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AC087499.8-201ENST00000578406 226 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 VN1R83P-201ENST00000595685 445 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 SNRPGP15-201ENST00000600149 222 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AC011468.4-201ENST00000603942 409 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AL034351.1-201ENST00000605288 668 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AC005332.6-201ENST00000613178 446 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms