Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 MIR5697-201ENST00000578045 78 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AC022884.3-201ENST00000579571 248 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 FGF7P1-201ENST00000582820 288 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 C8orf59P2-201ENST00000603441 271 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AL158211.4-201ENST00000606988 584 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AL354760.1-201ENST00000608357 643 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AC104010.1-201ENST00000616889 150 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AC015914.2-201ENST00000618167 288 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AC136475.10-201ENST00000620253 385 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AC004009.2-201ENST00000623016 728 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 ATE1-AS1-202ENST00000636460 506 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AL034370.1-201ENST00000397254 1590 ntBASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A3Q8N4M1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AL391684.1-202ENST00000641293 1636 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 DDX18P4-201ENST00000511690 1966 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 Y_RNA.11-201ENST00000362375 109 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 Y_RNA.25-201ENST00000362528 102 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 CCNG1P1-201ENST00000406783 885 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 RN7SKP202-201ENST00000410439 330 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 SNRPFP1-201ENST00000414761 252 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 RGS17P1-201ENST00000423358 553 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 OR2AH1P-201ENST00000425717 928 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC006946.1-201ENST00000429106 328 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 PGBD4P3-201ENST00000440731 581 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 RAB11AP1-201ENST00000442978 646 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AL033528.1-201ENST00000453780 140 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 DHFRP3-201ENST00000455595 559 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 snoU13.22-201ENST00000459428 104 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AP000942.1-201ENST00000463969 747 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 MTCYBP17-201ENST00000503579 789 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 PTGES3P3-201ENST00000511479 482 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 RFPL4AP5-201ENST00000514977 504 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 RNU6-507P-201ENST00000516045 100 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 TRAV8-5-201ENST00000537369 341 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 OR6C73P-201ENST00000546432 358 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC090515.3-201ENST00000560431 315 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 MIR4444-1-201ENST00000581696 74 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 MIR4444-2-201ENST00000584390 74 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC113403.1-201ENST00000604910 193 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC090578.1-201ENST00000604955 591 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AP003117.2-201ENST00000606010 545 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC009994.1-201ENST00000606889 253 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AP001330.5-201ENST00000607176 411 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC020634.1-201ENST00000608701 549 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 uc_338.13-201ENST00000618243 179 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC022106.2-201ENST00000620114 757 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC006065.6-201ENST00000625201 545 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 OR2L1P-202ENST00000641567 1023 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 NEAT1-202ENST00000501122 22743 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 MTND4P23-201ENST00000447723 1363 ntBASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC44A3Q8N4M1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 325.7 ms