Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13CQ709C8 RNU6-1159P-201ENST00000362933 107 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 AL583834.1-201ENST00000406943 343 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 GTF2IP23-201ENST00000423746 351 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS13CQ709C8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS13CQ709C8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13CQ709C8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS13CQ709C8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VPS13CQ709C8 MTCO1P42-201ENST00000457379 726 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 RPS6P4-201ENST00000494693 758 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 OR8L1P-201ENST00000534005 955 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS13CQ709C8 AC067747.1-201ENST00000608026 250 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 AL162233.1-201ENST00000620014 944 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC2.05□□□□□ -2.08
VPS13CQ709C8 AL031985.3-201ENST00000565390 2449 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 RPL9P7-201ENST00000330965 580 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 MIR423-201ENST00000362201 94 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS13CQ709C8 RNU6-253P-201ENST00000384730 105 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 RN7SKP32-201ENST00000410167 303 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 AC091917.2-201ENST00000505002 744 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 RNU6-1053P-201ENST00000515930 101 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS13CQ709C8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS13CQ709C8 AL365503.1-201ENST00000605247 905 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13CQ709C8 AC097714.1-201ENST00000511272 1647 ntBASIC2.05□□□□□ -2.08
VPS13CQ709C8 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13CQ709C8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.04□□□□□ -2.08
VPS13CQ709C8 USP9YP20-201ENST00000419224 558 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 AC092013.1-201ENST00000438795 332 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 AP004217.1-201ENST00000480579 346 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 AC026436.1-201ENST00000510537 270 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 SNORA64.4-201ENST00000516632 81 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS13CQ709C8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS13CQ709C8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13CQ709C8 MTND5P19-201ENST00000424872 1794 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS13CQ709C8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
VPS13CQ709C8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13CQ709C8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
VPS13CQ709C8 AL024474.1-201ENST00000404655 591 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS13CQ709C8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13CQ709C8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS13CQ709C8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13CQ709C8 AC092045.1-201ENST00000495716 1231 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS13CQ709C8 AC023813.4-201ENST00000607580 580 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13CQ709C8 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS13CQ709C8 RPL36AP51-201ENST00000487216 318 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 Y_RNA.670-201ENST00000516255 105 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 AC023043.2-201ENST00000589678 1026 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
VPS13CQ709C8 AC138915.3-201ENST00000562908 1389 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13CQ709C8 AC091564.4-201ENST00000533934 2194 ntBASIC2.04□□□□□ -2.08
VPS13CQ709C8 AC069528.2-201ENST00000624849 1991 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13CQ709C8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13CQ709C8 AL356292.1-201ENST00000283110 373 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 SNORD62.1-201ENST00000362541 86 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13CQ709C8 Z98941.1-201ENST00000407764 100 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 IGKV2D-23-201ENST00000518179 286 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.03□□□□□ -2.08
VPS13CQ709C8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13CQ709C8 RNU6-805P-201ENST00000365643 106 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 RPL21P3-201ENST00000395517 478 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 AL353729.1-201ENST00000425044 720 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 AC112673.1-201ENST00000513168 575 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS13CQ709C8 AC007621.1-201ENST00000604544 437 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 AC005046.1-201ENST00000608515 625 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 VN1R9P-201ENST00000614184 867 ntBASIC2.03□□□□□ -2.08
VPS13CQ709C8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13CQ709C8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS13CQ709C8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS13CQ709C8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS13CQ709C8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
VPS13CQ709C8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.09
VPS13CQ709C8 SKINT1L-201ENST00000401057 817 ntBASIC2.03□□□□□ -2.09
VPS13CQ709C8 AL592437.1-201ENST00000443781 492 ntBASIC2.03□□□□□ -2.09
VPS13CQ709C8 AC007677.1-201ENST00000445757 515 ntBASIC2.03□□□□□ -2.09
VPS13CQ709C8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.03□□□□□ -2.09
VPS13CQ709C8 RPS29P11-201ENST00000496507 171 ntBASIC2.03□□□□□ -2.09
VPS13CQ709C8 AC118282.1-201ENST00000506408 765 ntBASIC2.03□□□□□ -2.09
VPS13CQ709C8 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.03□□□□□ -2.09
VPS13CQ709C8 AC119751.1-201ENST00000513357 765 ntBASIC2.03□□□□□ -2.09
VPS13CQ709C8 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
VPS13CQ709C8 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
VPS13CQ709C8 AC010480.1-201ENST00000624823 684 ntBASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms