Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC092162.3-201ENST00000624511 1624 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 RNA5SP366-201ENST00000365454 123 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 SNORD116-23-201ENST00000384645 92 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 OR6C69P-201ENST00000394268 893 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 RPL23AP29-201ENST00000397284 453 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 MIR1284-201ENST00000408337 120 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AL807761.1-201ENST00000417622 171 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 DNAJC19P7-201ENST00000428811 344 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AL512649.1-201ENST00000428997 581 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 NANOGP6-201ENST00000429190 847 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AL365184.2-201ENST00000431139 435 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AL359385.1-201ENST00000456509 365 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 RN7SL303P-201ENST00000469773 251 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC015724.1-201ENST00000478577 156 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 SETP14-201ENST00000497538 873 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 KRT19P6-201ENST00000510983 209 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC099522.1-202ENST00000514718 367 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC087276.1-201ENST00000529659 480 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 RPS3AP4-201ENST00000555161 764 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 TRAV15-201ENST00000556680 249 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 TVP23BP1-201ENST00000557500 617 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AC022655.2-201ENST00000577280 318 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 MIR4277-201ENST00000578298 84 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AL137072.1-201ENST00000603444 466 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AL139395.1-201ENST00000603662 160 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AL008729.2-201ENST00000606393 473 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 U4.5-201ENST00000617137 123 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 MTND5P26-201ENST00000426018 1752 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 AL133243.3-201ENST00000617415 3004 ntBASIC4.11□□□□□ -1.75
ZNF549Q6P9A3 MARK2P15-201ENST00000432204 2186 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 RNF6P1-201ENST00000444889 1784 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 RNU6-582P-201ENST00000362989 107 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 RNU1-32P-201ENST00000363937 159 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 NCSTNP1-201ENST00000406229 144 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 FAR2P2-201ENST00000413041 594 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AC009480.2-201ENST00000422916 432 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 FAR2P4-202ENST00000425399 584 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 VDAC1P6-201ENST00000430062 855 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 COX6B1P7-201ENST00000430845 235 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 UBE2FP3-201ENST00000436366 524 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 UBE2V1P5-201ENST00000440070 405 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AC006011.1-201ENST00000442758 349 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms