Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC3BQ53EP0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.06□□□□□ -1.6
FNDC3BQ53EP0 AC012618.3-205ENST00000637896 1496 ntBASIC5.06□□□□□ -1.6
FNDC3BQ53EP0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
FNDC3BQ53EP0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC3BQ53EP0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 Y_RNA.450-201ENST00000384198 113 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 Y_RNA.604-201ENST00000410574 102 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 RPL26P29-201ENST00000415623 438 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 MTCYBP24-201ENST00000420387 1106 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 MTCO2P11-201ENST00000431069 680 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AC093414.1-201ENST00000434712 514 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AL512326.1-201ENST00000443050 721 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 RAC1P7-201ENST00000445367 377 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 OR1H1P-201ENST00000448731 937 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AC132479.1-201ENST00000449160 144 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 SNORD121B-201ENST00000458838 81 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 snoU109.4-201ENST00000458953 143 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 RPL21P103-201ENST00000479921 488 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 IGLV2-34-201ENST00000490007 283 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 TVP23CP2-201ENST00000571473 623 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AC012507.3-201ENST00000603556 477 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AL161616.1-201ENST00000611867 286 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AC002550.2-201ENST00000621246 394 ntBASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC3BQ53EP0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 A2MP1-204ENST00000566278 4130 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 MTCO1P24-201ENST00000515438 1558 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 AC073136.1-201ENST00000449426 2884 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 RNA5SP191-201ENST00000362585 102 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 RNU6-282P-201ENST00000365357 103 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 Y_RNA.409-201ENST00000383990 98 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 RNU6-356P-201ENST00000384140 107 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 RNU6-1103P-201ENST00000384150 107 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 RNA5SP56-201ENST00000410277 118 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 RNU2-47P-201ENST00000410649 186 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 HMGN1P24-201ENST00000412282 298 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 VTI1BP4-201ENST00000427516 527 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 ELOCP14-201ENST00000428070 331 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 ELOCP7-201ENST00000439968 331 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 MTATP6P23-201ENST00000440153 476 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 SLC25A18P1-201ENST00000449385 454 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 MTND1P9-201ENST00000453775 944 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 RPL38P1-201ENST00000460914 211 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 RPL35P6-201ENST00000490024 372 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 AC079382.1-201ENST00000493346 557 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 PGBD4P4-201ENST00000509673 613 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 SETP7-201ENST00000552169 453 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 SUB1P2-201ENST00000556401 297 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 MIR4330-201ENST00000579077 105 ntBASIC5.04□□□□□ -1.6
FNDC3BQ53EP0 RN7SL52P-201ENST00000584271 284 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms