Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PCDH1Q08174 CISD1P1-201ENST00000393907 327 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 AL359643.1-201ENST00000404109 423 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH1Q08174 AL139396.1-201ENST00000421137 167 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH1Q08174 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH1Q08174 AC099670.2-201ENST00000435130 321 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 FABP5P14-201ENST00000437273 393 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDH1Q08174 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH1Q08174 RPL23AP43-201ENST00000446445 471 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 ELOCP24-201ENST00000456370 334 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH1Q08174 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PCDH1Q08174 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH1Q08174 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH1Q08174 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDH1Q08174 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH1Q08174 CCDC34P1-201ENST00000507441 517 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 MTCYBP40-201ENST00000509390 1135 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH1Q08174 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 TRIM77BP-201ENST00000524985 1119 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH1Q08174 IMMP1LP2-201ENST00000552954 492 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
PCDH1Q08174 AL117187.1-201ENST00000555482 181 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH1Q08174 AC004817.2-201ENST00000561794 651 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 MIR5690-201ENST00000583739 73 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH1Q08174 AC007938.3-201ENST00000604965 623 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 Z82243.1-201ENST00000609432 473 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 AL590099.1-201ENST00000615276 138 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH1Q08174 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PCDH1Q08174 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH1Q08174 AL442639.1-201ENST00000625030 1899 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDH1Q08174 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PCDH1Q08174 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH1Q08174 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH1Q08174 AC091046.3-201ENST00000631455 1574 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDH1Q08174 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH1Q08174 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PCDH1Q08174 AC007842.1-201ENST00000597336 2039 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
PCDH1Q08174 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PCDH1Q08174 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PCDH1Q08174 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH1Q08174 RNU6-1252P-201ENST00000363054 104 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 RNA5SP30-201ENST00000365552 115 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH1Q08174 RNA5SP122-201ENST00000384457 108 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 RNU2-15P-201ENST00000410692 191 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDH1Q08174 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDH1Q08174 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDH1Q08174 HMGN1P2-201ENST00000445197 310 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 AL031584.1-201ENST00000447169 754 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 AC020550.1-201ENST00000447385 163 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 AL596266.1-201ENST00000448132 400 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 AC011225.1-201ENST00000457751 369 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 ACA64.1-201ENST00000459171 127 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 AC094085.1-201ENST00000468914 584 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 TRBVA-201ENST00000498804 316 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 HMGB1P21-201ENST00000502313 581 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 FTH1P24-201ENST00000503502 462 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 HMGN1P9-201ENST00000515212 298 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 RPS27AP18-201ENST00000515536 459 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 RNU6-1137P-201ENST00000517073 99 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 RNA5SP454-201ENST00000517231 127 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDH1Q08174 IGLV3-30-201ENST00000524362 298 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDH1Q08174 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDH1Q08174 AC092470.1-201ENST00000546187 132 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDH1Q08174 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDH1Q08174 SULT1C2P2-201ENST00000562517 294 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 MIR5583-1-201ENST00000580941 59 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDH1Q08174 MIR3149-201ENST00000584629 83 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDH1Q08174 AC090425.1-201ENST00000610007 140 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 MIR6864-201ENST00000617935 70 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PCDH1Q08174 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDH1Q08174 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDH1Q08174 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDH1Q08174 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH1Q08174 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
PCDH1Q08174 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH1Q08174 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH1Q08174 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
PCDH1Q08174 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDH1Q08174 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
PCDH1Q08174 AC093849.1-201ENST00000563631 2209 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms