Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.91□□□□□ -1.78
RIPK4P57078 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RIPK4P57078 RNU1-140P-201ENST00000365040 165 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RIPK4P57078 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.91□□□□□ -1.78
RIPK4P57078 UBA52P6-201ENST00000399822 382 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 AC105402.1-201ENST00000413336 545 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.91□□□□□ -1.78
RIPK4P57078 MTND4P11-201ENST00000417020 1058 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 AC073464.3-201ENST00000422564 712 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 RPS24P8-201ENST00000431490 402 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 AP000949.1-201ENST00000438328 629 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 NANOGNBP1-201ENST00000448444 480 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 AC140076.1-201ENST00000449897 361 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 HMGB3P21-201ENST00000452483 547 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.91□□□□□ -1.78
RIPK4P57078 PTGES3P5-201ENST00000455109 434 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.91□□□□□ -1.78
RIPK4P57078 PRELID3BP6-201ENST00000503839 571 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.91□□□□□ -1.78
RIPK4P57078 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.91□□□□□ -1.78
RIPK4P57078 Vault.1-201ENST00000516474 102 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.91□□□□□ -1.78
RIPK4P57078 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.91□□□□□ -1.78
RIPK4P57078 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.91□□□□□ -1.78
RIPK4P57078 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.91□□□□□ -1.78
RIPK4P57078 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.91□□□□□ -1.78
RIPK4P57078 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.91□□□□□ -1.78
RIPK4P57078 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.91□□□□□ -1.78
RIPK4P57078 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.91□□□□□ -1.78
RIPK4P57078 AC110792.4-201ENST00000609843 298 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 AC055764.2-201ENST00000610089 670 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 AC135507.2-201ENST00000612443 309 ntBASIC3.91□□□□□ -1.78
RIPK4P57078 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RIPK4P57078 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RIPK4P57078 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RIPK4P57078 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RIPK4P57078 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
RIPK4P57078 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RIPK4P57078 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
RIPK4P57078 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RIPK4P57078 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.9□□□□□ -1.78
RIPK4P57078 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RIPK4P57078 RNU6-452P-201ENST00000384406 107 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 RPL21P3-201ENST00000395517 478 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 AC096664.2-201ENST00000411843 406 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 AC010385.1-201ENST00000412374 256 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 AC091390.3-201ENST00000426478 338 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.9□□□□□ -1.79
RIPK4P57078 GAPDHP27-201ENST00000447427 1020 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 AC146507.2-201ENST00000460608 476 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 RPL7P5-201ENST00000471472 736 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 RPS29P26-201ENST00000477483 171 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.9□□□□□ -1.79
RIPK4P57078 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.9□□□□□ -1.79
RIPK4P57078 RNU6-467P-201ENST00000517027 110 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 AC103833.1-201ENST00000517442 172 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 MTND1P36-201ENST00000522384 936 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 HAUS1P3-201ENST00000523909 662 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 OR5G4P-201ENST00000525251 760 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 CKS1BP1-201ENST00000555221 240 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.9□□□□□ -1.79
RIPK4P57078 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.9□□□□□ -1.79
RIPK4P57078 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.9□□□□□ -1.79
RIPK4P57078 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.9□□□□□ -1.79
RIPK4P57078 AC011471.1-201ENST00000585766 187 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 SUMO2P14-201ENST00000604488 293 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.9□□□□□ -1.79
RIPK4P57078 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RIPK4P57078 AC024023.1-201ENST00000624530 922 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RIPK4P57078 AC000403.1-201ENST00000613696 3585 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RIPK4P57078 AL035425.3-201ENST00000564206 4996 ntBASIC3.9□□□□□ -1.79
RIPK4P57078 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RIPK4P57078 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RIPK4P57078 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.89□□□□□ -1.79
RIPK4P57078 SNORA46-201ENST00000384762 135 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 RPL5P18-201ENST00000406671 891 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 RNA5SP274-201ENST00000410484 108 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 NPM1P24-201ENST00000428039 894 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 AC022018.1-201ENST00000430685 241 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 MTND4LP7-201ENST00000431728 294 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 MED6P1-201ENST00000439659 713 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.89□□□□□ -1.79
RIPK4P57078 MTND2P39-201ENST00000457230 764 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 AC093278.1-201ENST00000494700 600 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 KCTD9P5-201ENST00000504141 1170 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.89□□□□□ -1.79
RIPK4P57078 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.89□□□□□ -1.79
RIPK4P57078 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.89□□□□□ -1.79
RIPK4P57078 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RIPK4P57078 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.89□□□□□ -1.79
RIPK4P57078 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.89□□□□□ -1.79
RIPK4P57078 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.89□□□□□ -1.79
RIPK4P57078 MIR4716-201ENST00000579628 84 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.89□□□□□ -1.79
RIPK4P57078 AC007566.2-201ENST00000603642 413 ntBASIC3.89□□□□□ -1.79
RIPK4P57078 AL160281.1-201ENST00000605307 311 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms