Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC008013.2-202ENST00000637965 364 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN20P56880 AC022893.2-201ENST00000564832 3296 ntBASIC3.84□□□□□ -1.79
CLDN20P56880 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.84□□□□□ -1.8
CLDN20P56880 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLDN20P56880 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN20P56880 ZNF33CP-201ENST00000432492 2030 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN20P56880 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN20P56880 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN20P56880 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN20P56880 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN20P56880 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN20P56880 RNU6-462P-201ENST00000362659 105 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 Y_RNA.302-201ENST00000364997 102 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 RNA5SP88-201ENST00000365560 109 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CLDN20P56880 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN20P56880 RN7SKP56-201ENST00000410513 331 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN20P56880 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.83□□□□□ -1.8
CLDN20P56880 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN20P56880 UBE2FP3-201ENST00000436366 524 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN20P56880 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN20P56880 RPL23AP81-201ENST00000455252 467 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN20P56880 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CLDN20P56880 AL136126.1-201ENST00000473603 402 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN20P56880 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN20P56880 AC109458.1-201ENST00000508858 316 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN20P56880 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN20P56880 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN20P56880 MTCYBP43-201ENST00000513621 740 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 RN7SKP234-201ENST00000517173 224 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 AC008802.1-201ENST00000519121 791 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 MRPL49P2-201ENST00000521066 465 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.83□□□□□ -1.8
CLDN20P56880 HSPA8P13-201ENST00000523715 472 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 AP003730.1-201ENST00000524605 285 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN20P56880 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.83□□□□□ -1.8
CLDN20P56880 AC006064.5-201ENST00000541782 248 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN20P56880 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN20P56880 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN20P56880 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN20P56880 AL161729.3-201ENST00000603533 673 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 YWHAQP7-201ENST00000603536 658 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 AL513477.2-201ENST00000607858 568 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 FAM27D1-201ENST00000612308 341 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 AC009318.4-201ENST00000620496 486 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 AC007494.3-201ENST00000624660 743 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 GDI2P1-201ENST00000429312 1336 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 AP002907.1-201ENST00000606361 1430 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 ELL2P3-201ENST00000457883 1602 ntBASIC3.83□□□□□ -1.8
CLDN20P56880 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN20P56880 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CLDN20P56880 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN20P56880 LARP1BP1-201ENST00000506036 1359 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 SNORD116-9-201ENST00000384000 95 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 SNORD116-3-201ENST00000384287 95 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 SNORD116-7-201ENST00000384404 95 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 SNORD116-5-201ENST00000384462 95 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AL021407.1-201ENST00000404531 386 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN20P56880 RNU6-920P-201ENST00000410926 92 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN20P56880 AMD1P2-201ENST00000412936 992 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN20P56880 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN20P56880 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN20P56880 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.82□□□□□ -1.8
CLDN20P56880 ZYG11AP1-201ENST00000430329 837 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN20P56880 MTND4P32-201ENST00000437189 1237 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN20P56880 AC118469.1-201ENST00000442943 488 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 ARPC3P5-201ENST00000448802 534 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 OR6C5P-201ENST00000452388 923 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN20P56880 USP9YP34-201ENST00000453983 808 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AC092754.2-201ENST00000463506 460 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN20P56880 AC104164.2-201ENST00000496953 495 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 TMEM251P1-201ENST00000503717 318 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 KCTD9P2-201ENST00000512203 1013 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 RNU6-150P-201ENST00000516237 95 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 RNA5SP73-201ENST00000516744 108 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
CLDN20P56880 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.82□□□□□ -1.8
CLDN20P56880 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN20P56880 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN20P56880 AC012435.1-202ENST00000568772 240 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AC136624.4-201ENST00000573044 370 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms