Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GFRA1P56159 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.89□□□□□ -1.63
GFRA1P56159 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.89□□□□□ -1.63
GFRA1P56159 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.89□□□□□ -1.63
GFRA1P56159 MIR1269B-201ENST00000580405 75 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.89□□□□□ -1.63
GFRA1P56159 AL669831.4-202ENST00000590817 238 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.89□□□□□ -1.63
GFRA1P56159 AP001429.1-201ENST00000602568 530 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 AC007497.1-201ENST00000610421 561 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 AC109583.2-201ENST00000617367 129 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 RMST_7.1-201ENST00000621935 268 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.89□□□□□ -1.63
GFRA1P56159 AC000095.2-202ENST00000637415 154 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.89□□□□□ -1.63
GFRA1P56159 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
GFRA1P56159 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
GFRA1P56159 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.89□□□□□ -1.63
GFRA1P56159 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GFRA1P56159 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
GFRA1P56159 AC004972.1-201ENST00000623934 2209 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.89□□□□□ -1.63
GFRA1P56159 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
GFRA1P56159 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
GFRA1P56159 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.89□□□□□ -1.63
GFRA1P56159 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GFRA1P56159 AC000374.1-201ENST00000434698 1745 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 AC004076.2-201ENST00000620532 3323 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.88□□□□□ -1.63
GFRA1P56159 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
GFRA1P56159 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA1P56159 AC138907.8-201ENST00000623981 2256 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
GFRA1P56159 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA1P56159 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA1P56159 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA1P56159 RNU4-79P-201ENST00000362764 141 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 SNORA51.2-201ENST00000364595 132 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
GFRA1P56159 GLULP6-201ENST00000399502 913 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AL122016.1-201ENST00000403365 367 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 RNA5SP487-201ENST00000410186 122 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 RNA5SP56-201ENST00000410277 118 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 RNA5SP107-201ENST00000411358 122 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA1P56159 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.88□□□□□ -1.63
GFRA1P56159 AL353678.1-201ENST00000422735 741 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.88□□□□□ -1.63
GFRA1P56159 ERLEC1P1-201ENST00000433806 578 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 GAPDHP25-201ENST00000447061 1001 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 MTND1P18-201ENST00000448191 573 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AL118496.2-201ENST00000448300 230 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA1P56159 AC005008.1-201ENST00000456151 612 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 RPS4XP1-201ENST00000482189 787 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AC135721.1-201ENST00000497954 479 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA1P56159 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA1P56159 RN7SKP219-201ENST00000516825 296 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 RNA5SP503-201ENST00000517047 117 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 RNU6-1314P-201ENST00000517139 104 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA1P56159 AC107953.1-201ENST00000522216 297 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AC107918.3-201ENST00000533272 382 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.88□□□□□ -1.63
GFRA1P56159 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA1P56159 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA1P56159 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
GFRA1P56159 OR7E18P-201ENST00000592589 702 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA1P56159 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.88□□□□□ -1.63
GFRA1P56159 AC135507.2-201ENST00000612443 309 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.88□□□□□ -1.63
GFRA1P56159 AC093838.1-201ENST00000613014 469 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AL442067.2-201ENST00000614033 363 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA1P56159 TPTEP1-208ENST00000636884 213 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
GFRA1P56159 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
GFRA1P56159 AC073869.8-201ENST00000641806 335 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 AC109446.4-201ENST00000623235 2755 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA1P56159 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA1P56159 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA1P56159 EIF2AP4-201ENST00000424793 1781 ntBASIC4.88□□□□□ -1.63
GFRA1P56159 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
GFRA1P56159 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA1P56159 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA1P56159 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
GFRA1P56159 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
GFRA1P56159 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA1P56159 MAPK10-338ENST00000641647 3362 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA1P56159 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
GFRA1P56159 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
GFRA1P56159 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.87□□□□□ -1.63
GFRA1P56159 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.87□□□□□ -1.63
GFRA1P56159 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA1P56159 RNU6-179P-201ENST00000363350 107 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 SNORA70E-201ENST00000384492 135 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms